Transcript Information: S_Transcript_237279.p1


Annotated TAIR IDAT2G20710.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8926110-8927722 | Forward length=490
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3402230837861
Replicate 21.1110757331123
Replicate 30.53072621823311
Condition 2: 8 Hour
Replicate 11.0739405195678
Replicate 21.2875884109195
Replicate 31.5335142161857
Condition 3: 24 Hour
Replicate 10.47147230555239
Replicate 21.6304900414638
Replicate 31.4516284549707


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_237279.p1 GENE.S_Transcript_237279~~S_Transcript_237279.p1 ORF type:5prime_partial len:139 (+),score=19.30,PPR|PF01535.16|0.00029,PPR|PF01535.16|1.6e+02,PPR_2|PF13041.2|3.3e-05,PPR_2|PF13041.2|2.1e+03 S_Transcript_237279:3-419(+)
CTGGCCAAAGACATCAAAGTGCCAAACTTCTTGATAAGCCATTACTGCAAAAATGGTCAATTGGAGAAGGCTGAGGCTCTCATAGATAAGGTGAGCACGAAGAAATGGCAAAAGCCAAACTTACATACATGGTTTTGGATGTCATTAGGTTATCTTCGAAGCAATCAGATGCCAAAGGCAGTAGAAGCATTGAAGTCTGCTGTCTTGGAACGTTATCCTACAGGAAGCTGGAAGCCAGACAAAGAAACTCTAGTGGCCTGTCTAAACCACTTGAAAGAGGGAGATAGTGTGCGATCTTGTGAATTCATAACTTTACTTCATAACCAGGGTATCTTCACTTTCAAAATTCGAGCCAGATTTCTTGAATATGTTTCTGGTGAATATGCTAGTGAAGACCCTTTCGAAGGAATCAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_237279.p1 GENE.S_Transcript_237279~~S_Transcript_237279.p1 ORF type:5prime_partial len:139 (+),score=19.30,PPR|PF01535.16|0.00029,PPR|PF01535.16|1.6e+02,PPR_2|PF13041.2|3.3e-05,PPR_2|PF13041.2|2.1e+03 S_Transcript_237279:3-419(+)
LAKDIKVPNFLISHYCKNGQLEKAEALIDKVSTKKWQKPNLHTWFWMSLGYLRSNQMPKAVEALKSAVLERYPTGSWKPDKETLVACLNHLKEGDSVRSCEFITLLHNQGIFTFKIRARFLEYVSGEYASEDPFEGIS*

Click here to download the sequence:
Link to NCBI Protein BLAST