Transcript Information: S_Transcript_238101.p1


Annotated TAIR IDAT2G03380.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:1028292-1030361 | Forward length=689
E-Value1.9E-265
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42637652179194
Replicate 20.1767379670829
Replicate 30.24623145638986
Condition 2: 8 Hour
Replicate 10.71179540444369
Replicate 20.86619974706552
Replicate 30.93914949394444
Condition 3: 24 Hour
Replicate 10.26248858666936
Replicate 20.27232884404156
Replicate 30.50511437393423


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238101.p1 GENE.S_Transcript_238101~~S_Transcript_238101.p1 ORF type:5prime_partial len:749 (+),score=152.32,PPR|PF01535.16|45,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|6.4,PPR|PF01535.16|0.00052,PPR|PF01535.16|6.7e-07,PPR|PF01535.16|6.3,PPR|PF01535.16|0.16,PPR|PF01535.16|0.00023,PPR|PF01535.16|0.074,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.003,PPR|PF01535.16|8.9e-08,PPR|PF01535.16|0.86,PPR|PF01535.16|0.009,PPR|PF01535.16|0.72,PPR_2|PF13041.2|19,PPR_2|PF13041.2|0.39,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|6.2,PPR_2|PF13041.2|1.8e-06,PPR_2|PF13041.2|13,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|7.5e-11,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|0.26,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|68,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|9.6e+02,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.0078,PPR_3|PF13812.2|6,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|4.6,PPR_1|PF12854.3|4.5e+03,PPR_1|PF12854.3|1.1e+04,PPR_1|PF12854.3|3.9e+02,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|5.9e+03,PPR_1|PF12854.3|15,PPR_1|PF12854.3|0.3,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|4.7e-05,PPR_1|PF12854.3|8.7e+02,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|1.2e+03 S_Transcript_238101:3-2249(+)
TACACTACAAATGCAGTTTTCTTCATTCTGAACCATGACACAAAATGGCGGGACCTTTCGCACTCAAATCAAAACCATCCCCCAAATATGAATCGACTAGTATTTTCTCATGTAATCAAGCAAAAAATCCCTAACTTTCCCAAATGCCCACTCCAAACGAGGGCTCTTTCTTTACTTTCTTCTCTCCCCTATCAAAAACCATTTGCATCAGACACCATTGAAGCAACCCAACAAACCTTAGCTTCAATTCGTTCTATCTCTTCAAACCCATGTTACTCTCTTCTTACTATCTGTAAAAATCTAACCTTTCTGAAAAAGGCTCATGCTTTACTCATTGTTCATGGCCTCTCTAATGACCTTATATGCCTCACAAAGCTCATGAGTTTGTATGGTTCTTTTGGTCATGTTAGTTTTGCTCGCATGGTTTTTGATAGAATCCCAAACCCAGATCTTTATTCCTTCAAAGTTATGATTAGGTGGTACTTTTTGAATGAATTGCACTCTGATACAATTTTGTTCTACAACTGTTTGAGGAAATGCCTCAGAGAGAATGACGATATTGTTTTCTCTATTGTGTTGAAAGCTTGTTGTGAATTGAGGGATATTGATGAGGGGAGAAAAGTTCATTGCCATATTTTCAAGGCTGGGCGTCCTGATAGTTTTGTCATGACTAGTTTGGTTGATGTATATGCTAAGTGTGGGGATATGGAGAGTGCCCGGTGTGTGTTTGATGAAATTGAGGATAGAAATGTGGTTTCTTGGACATCTTTGATTGCTGGATATGTTCAGAATGACTGTTCTGAAGAGGGTTTGAGTTTGTTTAACAAGATGAGGGAAAGCCTTGTTGATGGTAATCAGTTCACTTTGGGGACCTTAGTGGCTGGTTGTGGAAAGTTGGGAGCTTTGCATCAAGGGAAATGGATTCATGGGTATATGATTAAGGCTGGTATTGAATTGAGCTCTTTCTTGGAAACTGCTCTTCTAGATATGTATGTCAAATGTGGAAGCATCGACGATGCACGTTCTGTGTTTGACAAGTCATCTATGATTGATGTTGTGACTTGGACTGCTATGATTGTTGGTTATACTCAAAGTGGTCAGCCAGTTGAGGCCTTGAAGTTGTATACCAACAAGAGATGGGCTGGTATTTGGCCTAATTCCATGACCATAGCTAGTGTGCTTTCGGCTTGTGCTCAGCTCCAAGATTTATGTGTGGGGCGGTCAGTTCACTGCCTTGCAACTGTGCATGGTTTAGACGATGCTGCTGTCAAACATGCTCTCATTGACATGTATGCAAAATGCCGCATGATTGGAGAGTCTCGGTATATATTTGAGTCGATGAAGGACAAGGATGTTATTGCTTGGAATTCGATAATTTCGGGGTATTTTCAGAATGGATGTGCTCTTGAAGCCCTCCGACTCTTTCATCAGATGAGACTCGAGTCACTATCTCCAGATGCAGTCACGTTGGTCAGTGTCATCTCTGCGTGTGCTTCCATCAGTGCCATAGCAGTTGGCTCTTCTGTGCACGCTTATTTTATCAAGGAAGGATTGTCATCTGTTAATACATATGTAGGCACTGCTCTTCTGAATTTCTATGCCAAATGTGGTGAAGCTTTATCTGCCCGTGAAGTTTTTGATGAGATGAAAGATAAGAATGCAGTAACATGGAGTTCAATGATTAGGGGATATGGAATGCATGGTGATGGTGATGAGTCGTTTGCATTATTCAACGATATGTTGCAGGAGAATGTGGAGCCCAATGAAGTTATATTCACAGCTGTTTTATCTGCCTGCAGCCACACAGGAAAGGTTGGGGGAGGGTGGAAATACTTCACTTCTATGTGTCGGGAGTATAATTTCGTGCCCACCATGAAGCATTATGCATGTATGGTGGATATATTGGCTCGTGCAGGAAAGCTGGAGGAAGCGGTAGACTTTATGGAGAAAATGCCCATTCAGCCAGATATTACAGTGTTAGGGGCATTTGTTCATGGATGTAGCCTCCATTCAAAGTTCGACCTGGGAGAAATTGCAGCAAGGAGAATGTTAAAAATGCATCCTAATGAAGCTTGTTACTATGTGCTTCTTTATAAGCTATATGCTTCAGATGGAAGGTGGGATCAGGCAAATGAGATCAGAAATTTGATGAAGGAAAGAGGGCTAAGCAAGTCCCCTGGTTGGAGTTTCACAGAGATGGATGCTTATGATCAGTTCCCTTTCTTTCCAGCTTCTTCCACCGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238101.p1 GENE.S_Transcript_238101~~S_Transcript_238101.p1 ORF type:5prime_partial len:749 (+),score=152.32,PPR|PF01535.16|45,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|6.4,PPR|PF01535.16|0.00052,PPR|PF01535.16|6.7e-07,PPR|PF01535.16|6.3,PPR|PF01535.16|0.16,PPR|PF01535.16|0.00023,PPR|PF01535.16|0.074,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.003,PPR|PF01535.16|8.9e-08,PPR|PF01535.16|0.86,PPR|PF01535.16|0.009,PPR|PF01535.16|0.72,PPR_2|PF13041.2|19,PPR_2|PF13041.2|0.39,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|1.3e-07,PPR_2|PF13041.2|6.2,PPR_2|PF13041.2|1.8e-06,PPR_2|PF13041.2|13,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|7.5e-11,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|0.26,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|68,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|9.6e+02,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.0078,PPR_3|PF13812.2|6,PPR_3|PF13812.2|3.6,PPR_3|PF13812.2|4.6,PPR_1|PF12854.3|4.5e+03,PPR_1|PF12854.3|1.1e+04,PPR_1|PF12854.3|3.9e+02,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|5.9e+03,PPR_1|PF12854.3|15,PPR_1|PF12854.3|0.3,PPR_1|PF12854.3|2.2e+03,PPR_1|PF12854.3|4.7e-05,PPR_1|PF12854.3|8.7e+02,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|1.2e+03 S_Transcript_238101:3-2249(+)
YTTNAVFFILNHDTKWRDLSHSNQNHPPNMNRLVFSHVIKQKIPNFPKCPLQTRALSLLSSLPYQKPFASDTIEATQQTLASIRSISSNPCYSLLTICKNLTFLKKAHALLIVHGLSNDLICLTKLMSLYGSFGHVSFARMVFDRIPNPDLYSFKVMIRWYFLNELHSDTILFYNCLRKCLRENDDIVFSIVLKACCELRDIDEGRKVHCHIFKAGRPDSFVMTSLVDVYAKCGDMESARCVFDEIEDRNVVSWTSLIAGYVQNDCSEEGLSLFNKMRESLVDGNQFTLGTLVAGCGKLGALHQGKWIHGYMIKAGIELSSFLETALLDMYVKCGSIDDARSVFDKSSMIDVVTWTAMIVGYTQSGQPVEALKLYTNKRWAGIWPNSMTIASVLSACAQLQDLCVGRSVHCLATVHGLDDAAVKHALIDMYAKCRMIGESRYIFESMKDKDVIAWNSIISGYFQNGCALEALRLFHQMRLESLSPDAVTLVSVISACASISAIAVGSSVHAYFIKEGLSSVNTYVGTALLNFYAKCGEALSAREVFDEMKDKNAVTWSSMIRGYGMHGDGDESFALFNDMLQENVEPNEVIFTAVLSACSHTGKVGGGWKYFTSMCREYNFVPTMKHYACMVDILARAGKLEEAVDFMEKMPIQPDITVLGAFVHGCSLHSKFDLGEIAARRMLKMHPNEACYYVLLYKLYASDGRWDQANEIRNLMKERGLSKSPGWSFTEMDAYDQFPFFPASSTG*

Click here to download the sequence:
Link to NCBI Protein BLAST