Transcript Information: S_Transcript_23818.p3


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value3.3E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6427778540235
Replicate 22.1790409439521
Replicate 32.2768809979754
Condition 2: 8 Hour
Replicate 12.3694878130148
Replicate 21.6571739733131
Replicate 33.6842205737005
Condition 3: 24 Hour
Replicate 12.4272092767327
Replicate 22.5182012862608
Replicate 30.31138326426069


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23818.p3 GENE.S_Transcript_23818~~S_Transcript_23818.p3 ORF type:complete len:81 (+),score=14.39,Sigma70_r2|PF04542.10|4.7e-16 S_Transcript_23818:1259-1501(+)
ATGATCAAAAGCAACATAAGACTTGTTATATCCATTGCCAAAAATTATCAAGGATCTAGAATTAACCTTCAGGATCTTGTTCAGGAAGGATGCCGAGGCCTGGTCAGGACTGCAGAAAAGTCTGATGCTTCCAAAGGTTATAAGTTCTCAACTTTTGCTCACTGGTGGAAGAAACAAGCAGTTCGGAAATCTCTTTCTGATCAGTCCATGACTATCCGGTCACCAGTGAGTTTCCATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23818.p3 GENE.S_Transcript_23818~~S_Transcript_23818.p3 ORF type:complete len:81 (+),score=14.39,Sigma70_r2|PF04542.10|4.7e-16 S_Transcript_23818:1259-1501(+)
MIKSNIRLVISIAKNYQGSRINLQDLVQEGCRGLVRTAEKSDASKGYKFSTFAHWWKKQAVRKSLSDQSMTIRSPVSFHW*

Click here to download the sequence:
Link to NCBI Protein BLAST