Transcript Information: S_Transcript_23822.p1


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value1.3E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.679754420404
Replicate 222.062789557515
Replicate 325.982451837217
Condition 2: 8 Hour
Replicate 122.265587886225
Replicate 222.327015275719
Replicate 324.177895279398
Condition 3: 24 Hour
Replicate 117.729815257897
Replicate 218.349057869428
Replicate 316.730454304796


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23822.p1 GENE.S_Transcript_23822~~S_Transcript_23822.p1 ORF type:5prime_partial len:499 (+),score=119.34,Sigma70_r2|PF04542.10|1.4e-16 S_Transcript_23822:3-1499(+)
GGTTCTTCTTGCATTTCGGCTCTTCTGATTTCCTTATCCGTTGCGGGGTTTTATCGCATATCAGTTATCACCCCAAGATTTAGCAGAGCAGTAGCAGTAGCAGTAGCAGCTGCAACATTAACAGTTGTGTTCTTTCTCTCTCCTCTCTATCCCCTTACCATCTTCCTCTGTACACTACTGCTACTTCAAGCCGGCACCCTGATAATCAGAAGGAAGATGGCATCATCATCATCATCATGTCTATTGCCGCAGTTCAAATGGCACCCCCTTCCTCATCCCTCTACCTCTTCTTCTTCCTCCTCCTTCTTGAGAAATAGAGATTCTGTCTGTTTTCGCGTTCATTGTGCTGTTTCAACGCCTCCCCCTCCGATCACTAGTGCGGAAACTGCGGTGCTTGATGTAGAGAAGCTGCGGTTGCCTTATGTTGAAGCCAATTCCAATTCTCTTCCTAGTTATGGCCTTTTGACTTATTCGAGCCCTACAAGTTCTTCGACTGAGGCTAAGTTTGAATCCACATTGGTGGCAAAAACACTTATTGAGGATGAAGAAGCTGTTATTGCTGCTGCAGCTGCTGAAGCACTTGCCCTGGCCAGGGCAGCAGCCAAGCTCGCAAAGGATGCAGCCCTAATGGCTGGCAGTACCCATTCTGCAAAGCCAGAATCTAACTCTGAAGTACTCTCTGATGGTCAATCTCTCCAGATTAAGAGTGCTCAACTTTTAGAAGATGAGCCATTTGGGATTGCCCAAACTTCTGAGACCGCTGACACTTCTCTTAGAGAAGGCTATTCGATCCAGTACCCAAACTCTGAAACGGATGACTTGGAGCCAACAAGTGAGGAGCTTCAACTCCTGGAGGCTGAACTTTCTGAGAGCATAGCTGTTAGATCAACACGCCAGGTGGAGAGAAAGGCCAGGAGAGCAAGAGCTGCAGAGAAGGCTGCATCTAATGTACCTCCTGTTAAATCAGGGTCTAGCCGCAGGAGACGCACCTCTGTGCAAGAAGTAGACTACTCTGATCCACTGCGCTACTTAAGGGGAACCACCAGCTCATCTAAGCTCCTTACTGCTTCTGAAGAGCTAGAATTGTCAGCAGGAATCCAGGACTTGCTAAAACTAGAAAGGATTCATGATGAGCTGCAAGAAAGATGTGGGGGTGAGCCATCCTTTGCACAGTGGGCAGCTGCAGCAAGTATTGATCAGAGGACACTAAGAAAGCGTGTAAACCATGGTATTATTTGCAAAGATAGGATGATCAAAAGCAACATAAGACTTGTTATATCCATTGCCAAAAATTATCAAGGATCTAGAATTAACCTTCAGGATCTTGTTCAGGAAGGATGCCGAGGCCTGGTCAGGACTGCAGAAAAGTCTGATGCTTCCAAAGGTTATAAGTTCTCAACTTTTGCTCATTGGTGGATGAAACAAGCGGTTCGGAAATCTCTTTCTGATCGGTCCAGGACTATCTGGTTACCATTTCACATGGTTGAGGCAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23822.p1 GENE.S_Transcript_23822~~S_Transcript_23822.p1 ORF type:5prime_partial len:499 (+),score=119.34,Sigma70_r2|PF04542.10|1.4e-16 S_Transcript_23822:3-1499(+)
GSSCISALLISLSVAGFYRISVITPRFSRAVAVAVAAATLTVVFFLSPLYPLTIFLCTLLLLQAGTLIIRRKMASSSSSCLLPQFKWHPLPHPSTSSSSSSFLRNRDSVCFRVHCAVSTPPPPITSAETAVLDVEKLRLPYVEANSNSLPSYGLLTYSSPTSSSTEAKFESTLVAKTLIEDEEAVIAAAAAEALALARAAAKLAKDAALMAGSTHSAKPESNSEVLSDGQSLQIKSAQLLEDEPFGIAQTSETADTSLREGYSIQYPNSETDDLEPTSEELQLLEAELSESIAVRSTRQVERKARRARAAEKAASNVPPVKSGSSRRRRTSVQEVDYSDPLRYLRGTTSSSKLLTASEELELSAGIQDLLKLERIHDELQERCGGEPSFAQWAAAASIDQRTLRKRVNHGIICKDRMIKSNIRLVISIAKNYQGSRINLQDLVQEGCRGLVRTAEKSDASKGYKFSTFAHWWMKQAVRKSLSDRSRTIWLPFHMVEAT*

Click here to download the sequence:
Link to NCBI Protein BLAST