Transcript Information: S_Transcript_238464.p1


Annotated TAIR IDAT5G42470.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Brain/reproductive organ-expressed protein (InterPro:IPR010358); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16982365-16984738 | Forward length=382
E-Value3.1E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.78262264052
Replicate 211.928962332934
Replicate 310.407318262399
Condition 2: 8 Hour
Replicate 112.481790133125
Replicate 212.918127823464
Replicate 314.042723750263
Condition 3: 24 Hour
Replicate 112.327165224351
Replicate 211.242678183542
Replicate 311.717327715763


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238464.p1 GENE.S_Transcript_238464~~S_Transcript_238464.p1 ORF type:complete len:381 (+),score=80.82,BRE|PF06113.8|1e-40 S_Transcript_238464:232-1374(+)
ATGGGAATCGAAGGAGTTCCACCCATCATAGCAGCTCAACTCAACTACCTCCTTTGTCATTCTCCTTACTCTATCAAAGTTGAGCAGATGTGGTCTGGGTCAAAGAACTTACCATGGTTTGATCGTTTCACTTTGAACATTCCTTTTTGCCTTGATTCTGTCAAATGGGACATTATATTCAATTTGCAGAGCCCATTATCAGCACCTGATGTGATATTTGGGCCTGATGATGATAAATTTCATTCCTTCCTTTTGCTATGTGATGGGCAATTAGCTGGGGATAGAAAGAAGTCACCTTTGTATACTCTAAGCAATTGGAATCCCAAAGACCCTTCTAGATTATTGACTCTCATCTTTCAACTTAGGGATATGTACTCAGCTTACCAAAGAAAGCGCGTCGGAGAAGTTGATGATGATAGGGTGAAGTTTGAAATTAGCACTATATTGTCTAGGGAGGGCCTTGAGATGTGTTCAAGTTCAGCTGCTGAAAAGCCAGAGGAGGTGACATTTGCAGTACCTTTGCTGGACATGAATATAAACAATATGATCCCTTCTTGCCCCTGGAGACAGCAGCAAAAACTTTACCTACAGGTAATATATCCGGTCGGTAGGAAGTATCAATCTGCTTCAGCCCCACGTTTGAAGTTGATGTCAACTCCTGAATTGAGCTCTCTATTTTCTGCTGAAGATGTCAAATTACCGACATGGTTGGATGGAATGTGCTTGGCTGAATATCTTCCTGCTGTAGAAGAAACTCTGCAGATGCAGATATCGGAGGCAGTTTCACTTATTAGCATCAGAAGGTACTTCATTGAGTCGTTGCCTGTTGTCTTTGGAAGGCCATTAGAAGCTGATCCGATATTTGGCAGAAAGGCAACTGTTCTTGTTGCTAATGGAGTCTTCACATTTTTGGTGCATTTCAATATTCCTATCCAGTTCCCAAAGCAGCAGCCCACACTGATCCTTCAAAGTTCACAGCATTTTAACAACCAAGGGGCTCCTATCCGTTCCCCTGCATTGTCGGAATATCCATGGAGCCCTAGATGGGAACCATCAGAAATGGCTTTGCGAATATTTGATTTCCTGGTGGAGGAATCTTCAAATTTCAAGAAGACTTGCAATGAGGCCATTCAGCAACATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238464.p1 GENE.S_Transcript_238464~~S_Transcript_238464.p1 ORF type:complete len:381 (+),score=80.82,BRE|PF06113.8|1e-40 S_Transcript_238464:232-1374(+)
MGIEGVPPIIAAQLNYLLCHSPYSIKVEQMWSGSKNLPWFDRFTLNIPFCLDSVKWDIIFNLQSPLSAPDVIFGPDDDKFHSFLLLCDGQLAGDRKKSPLYTLSNWNPKDPSRLLTLIFQLRDMYSAYQRKRVGEVDDDRVKFEISTILSREGLEMCSSSAAEKPEEVTFAVPLLDMNINNMIPSCPWRQQQKLYLQVIYPVGRKYQSASAPRLKLMSTPELSSLFSAEDVKLPTWLDGMCLAEYLPAVEETLQMQISEAVSLISIRRYFIESLPVVFGRPLEADPIFGRKATVLVANGVFTFLVHFNIPIQFPKQQPTLILQSSQHFNNQGAPIRSPALSEYPWSPRWEPSEMALRIFDFLVEESSNFKKTCNEAIQQH*

Click here to download the sequence:
Link to NCBI Protein BLAST