Transcript Information: S_Transcript_238473.p1


Annotated TAIR IDAT5G42470.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Brain/reproductive organ-expressed protein (InterPro:IPR010358); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16982365-16984738 | Forward length=382
E-Value3E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9533806182696
Replicate 24.7962585994597
Replicate 34.6106840209001
Condition 2: 8 Hour
Replicate 16.1040066487446
Replicate 24.133928552993
Replicate 35.2517305693432
Condition 3: 24 Hour
Replicate 15.1446283582921
Replicate 24.434224004068
Replicate 35.5744373504061


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238473.p1 GENE.S_Transcript_238473~~S_Transcript_238473.p1 ORF type:complete len:276 (-),score=50.46,BRE|PF06113.8|3.9e-26 S_Transcript_238473:242-1069(-)
ATGGGAATCGAAGGAGTTCCACCCATCATAGCAGCTCAACTCAACTACCTCCTTTGTCATTCTCCTTACTCTATCAAAGTTGAGCAGATGTGGTCTGGGTCAAAGAACTTACCTTGGTTTGATCGTTTCACTCTGAACATTCCTTTTTGCCTTGATTCTGTCAAATGGGACGTTATATTCAATTTGCAGAGCCCATTATCAGCACCTGATGTGATATTTGGGCCTGATGATGATAAATTTCATTCCTTCCTTTTACTATGTGATGGGCAATTAGCTGGGGATAGAAAGAAGTCACCTTTGTATACTCTAAGCAATTGGAATCCCAAAGACCCTTCTAGATTATTGACTCTCATCTTTCAACTTAGGGATATGTACTCAGCTTACCAAAGAAAGCGCGTTGGAGAAGTTGATGATGATAGGGTGAAGTTTGAAATTAGCACTATATTGTCTAGGGAGGGCCTTGAGATGTGTTCAAGTTCAGCTGCTGAAAAGCCAGAGGAGGTGGCATTTGCAGTACCTTTGCTGGACATGAATATAAACAATATGATCCCTTCTTGCCCCTGGAGACAGCAGCAAAAACTTTACCTACAGGTAATATATCCGGTCGGTAGGAAGTATCAATCTGCTTCAGCCCCACGTTTGAAGTTGATGTCAACTCCTGAATTGAGCTCTCTATTTTCTGCTGAAGATGTCAAATTACCGACATGGTTGGATGGAATGTGCTTGGCTGAATATCTTCCTGCTGTAGAAGAAAATCTGCAGATGCAGGTATTTTCTTGTGGATTTTGCCATATTATTTTGCACTCTCCCATACATGTAGAAGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238473.p1 GENE.S_Transcript_238473~~S_Transcript_238473.p1 ORF type:complete len:276 (-),score=50.46,BRE|PF06113.8|3.9e-26 S_Transcript_238473:242-1069(-)
MGIEGVPPIIAAQLNYLLCHSPYSIKVEQMWSGSKNLPWFDRFTLNIPFCLDSVKWDVIFNLQSPLSAPDVIFGPDDDKFHSFLLLCDGQLAGDRKKSPLYTLSNWNPKDPSRLLTLIFQLRDMYSAYQRKRVGEVDDDRVKFEISTILSREGLEMCSSSAAEKPEEVAFAVPLLDMNINNMIPSCPWRQQQKLYLQVIYPVGRKYQSASAPRLKLMSTPELSSLFSAEDVKLPTWLDGMCLAEYLPAVEENLQMQVFSCGFCHIILHSPIHVED*

Click here to download the sequence:
Link to NCBI Protein BLAST