Transcript Information: S_Transcript_238536.p1


Annotated TAIR IDAT5G60030.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G75335.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24172082-24172960 | Reverse length=292
E-Value5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3266251543976
Replicate 24.9641276504408
Replicate 35.3022866240352
Condition 2: 8 Hour
Replicate 13.7319433054983
Replicate 23.355777295959
Replicate 32.9309290456849
Condition 3: 24 Hour
Replicate 12.4575493926918
Replicate 21.6997858682261
Replicate 35.6749599911511


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238536.p1 GENE.S_Transcript_238536~~S_Transcript_238536.p1 ORF type:3prime_partial len:80 (-),score=14.81 S_Transcript_238536:2-238(-)
ATGAAGACTGTGTCAGGGACAGTAGTATCGTCGAAGCCGGTATCTCTCTCAAAAGCAGCAAGAATCCTCTCGAAGTTTGTAGGTTCCGACAATTGTGCTTCCCCTTCATATATTGCTTATTTGAGGCGTGCTTCAGAGTCGTTTGATGAGCTTGTTCAGGTCCACAAAGATCTTAAAGGGACCGGAGGGTCCAAGCTCAAAGGTAAGAAGACAAAGACGAGGCATAATGCTTCTTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238536.p1 GENE.S_Transcript_238536~~S_Transcript_238536.p1 ORF type:3prime_partial len:80 (-),score=14.81 S_Transcript_238536:2-238(-)
MKTVSGTVVSSKPVSLSKAARILSKFVGSDNCASPSYIAYLRRASESFDELVQVHKDLKGTGGSKLKGKKTKTRHNASS

Click here to download the sequence:
Link to NCBI Protein BLAST