Transcript Information: S_Transcript_23854.p1


Annotated TAIR IDAT5G44790.1
Annotated Gene Namecopper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
Annotated Gene Symbol(s)RAN1, HMA7
Annotation TypeOrtholog
Chromosome Positionchr5:18075846-18079817 | Reverse length=1001
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.597993537905
Replicate 236.253820700059
Replicate 335.478048303537
Condition 2: 8 Hour
Replicate 157.55107813038
Replicate 255.098160425888
Replicate 356.004273538955
Condition 3: 24 Hour
Replicate 141.633013827961
Replicate 238.566664496123
Replicate 336.495723321575


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23854.p1 GENE.S_Transcript_23854~~S_Transcript_23854.p1 ORF type:complete len:1009 (+),score=244.40,E1-E2_ATPase|PF00122.16|1.6e-60,E1-E2_ATPase|PF00122.16|1.1e+03,E1-E2_ATPase|PF00122.16|7.4e+03,Hydrolase|PF00702.22|3.3e-44,HMA|PF00403.22|1.2e-13,HMA|PF00403.22|3.2e-13,HMA|PF00403.22|0.56,HAD|PF12710.3|1.7e+03,HAD|PF12710.3|8.3e-11 S_Transcript_23854:378-3404(+)
ATGGCGCCGAGCGTGAAGGACCTCCAGCTGACGTCACCTCGGCGTCACAAGAAACCGGTGTTCTCTATCGGTGAAGATGAAGACGAGCTCGAGAATGTTGGTTTGCTCGACGATTACGATGAGGAATCTGGTAAGGAGGGTCAGGGGCTTTTTAATCCTAACCCTAATGCGAAGAGAATTCATGTCAGCGTTACGGGTATGACTTGTGCTGCTTGCTCTAATTCCGTTGAATCAGCTCTTCTTGCCATTGATGGTGTCCTCAAAGCTTCCGTTGCTTTGCTTCAGAATAAAGCTGACGTCATCTTTGACCCTGATTTGGTCAAGGATGAAGATATTAAAAATGCTATAGAAGATGCTGGGTTTGAGGCAGAAATTTTGTCGGAACCAACTACCTCTTCTTCGAAGCCGCGTAAAACAATGTCAGGTCAGTTTAATATCGGGGGTATGACTTGTGCAGCGTGTGTAAACTCTGTTGAAGGTATTTTGAGGGAGCTACCTGGGGTCACTAGAGCGGTGGTTGCTTTGACTACTAACTTGGGAGAAGTTGAATATGATCCTAATGTTATTAGCAAGGATGATATAGTTAATGCTATTGAAGATGCTGGCTTTGAGGCTTCCCTTGTACAGAGCAGTGAGCAGGACAAAATTCTTGTTGAGGTTAATGGGGTTTCTGGGGAGATAGATGCTCAGTCTTTGGAAAGTTTGCTTTCCCAAATTAAAGGGGTGCGGCAATTTCGTTTTGACAGGGCATCTAGAGAGCTGGAAGTTTGCTTTGATCCTGAAGTAATTACTTCTCGGTCCTTGGTTGATGGTGTAGAGGATGCAAGTGGTGGGCGATATAAATTACGTGTAAAAAGCCCTTTTGTAAGAATGACTTCCAAAGACTCAGAAGAATCCTCAAAAATGTTCCATCTATTTACATCCAGTCTGTTTCTTAGTGTCCCTGTATTCCTGATACAAGTCTGCCCACATGTACCTGTGCTATATCCTTTTCTTTTGTGGCGATGTGGACCTTTCTTAATGAGAGATTGGCTGAAATGGGGTTTGGTGAGTGTTGTTCAGTTTGTTGTTGGGAAGCGTTTCTATGTGGCAGCTGGCAAGGCACTAAGGAGGGGATCAACAAACATGGACGTCTTAGTTGCATTGGGAACATCAGCTTCCTATTTTTATTCAGTTTATGCGCTTCTATATGGTGCTGTAACTGGTTTTTGGTCTCCAACATACTTTGAAACAAGTTCTATGCTGATAACATTTGTCTTGTTGGGAAAGTATTTGGAGTCACTTGCAAAGGGCAAAACATCTGATGCTATCAAGAAACTAGTGGAACTTGCACCTGCTACAGCATTGCTGCTTGTGAAAGACAAAGGTGGAAAGTGTGTTGATGAACGAGATATAGATGCTTTGCTTATTCAACCTGGTGATCTCTTGAAGGTTCTCCCTGGTACTAAAGTTCCAGCAGATGGTACTGTGTTGTGGGGTTCAAGTTATGTCAATGAGAGCATGGTCACTGGTGAATCTGCCCCTGTCTTGAAAGAAATCAATGCACCTGTAATTGGGGGAACTATGAATTTGCATGGGGTCCTGCATGTTCAGGCAACCAAAGTGGGATCTGATACAGTTTTGAGCCAGATAATAAATTTGGTTGAGACTGCACAAATGTCTAAAGCTCCAATACAGAAGTTTGCAGACTACATTGCAAGCGTATTTGTTCCAACTGTTGTCGCTATGGCATTGTTGACGTTACTGGGTTGGTACATTGGTGGAGTGTCTGGCGCTTATCCTCAGAGTTGGCTGCCTGAAAATGGAAATTATTTTGTGTTTTCTTTGATGTTTGCTATATCAGTTGTGGTAATTGCATGCCCATGTGCTCTGGGATTGGCTACACCAACAGCTGTAATGGTTGCAACTGGGGTGGGTGCCAAAAATGGCATCTTGATAAAAGGAGGAGATGCATTGGAAAGTGCTCAAAAAATTAAGTATGTCATATTTGATAAGACTGGTACCCTTACACAGGGAAAAGCTACAGTTACAACTGCTAAAGTATTCACCGGCATTGATCTTGGAGAATTCCTCACCTTGGTGGCTTCTGCTGAGGTTAGTAGTGAACATCCTTTGGCAAAAGCAGTGGTTGAATATGCTCGGCATTTTCACTTCTTTGACCCTTCTGAAACCAAGGATTCACTGAATGACAACAAAGATTCGCGATATTCTGGTTGGCTTTTGGATGTCTCAGATTTCACTGCTGTTCCTGGGAGAGGAGTCCAATGTTTTATAGATGCAAAGCGTGTTTTGATTGGTAACCGAAGACTGCTTATTGAGAATGGGGTGACAATACCCACACATGTTGAAAGTTTTGTGGTGGAGCTGGAAGAGAGTGCTAAGACTGGAGTTCTTGTTGCTTGTGATGATGTTCTAATTGGAGTCTTGGGAGTAGCAGATCCTCTGAAGAGAGAAGCTGCTGTTGTGGTGGAGGGGCTTGAAAAGATGGGGATCAGACCTATAATGGTTACTGGGGATAACTTGCGAACAGCGCAAGCTGTCGCAAAAGAGGTTGGAATACACGATGTGAGGGCTGAAGTAATGCCAGCCGGGAAAGCGGAAGTTATTTGTTCATTTCAGAAGGATGGAAGCATTGTGGCAATGGTAGGTGATGGCATTAATGACTCGCCTGCCCTTGCTGCTGCAGATGTTGGTATGGCCATTGGTGCAGGAACAGATGTTGCCATTGAGGCAGCAGATTACGTCTTGATGAGAAATAATTTAGAAGATGTAATCACAGCCATTGATCTTTCAAGGAAGACCTTCTTGCGAATCCGATTGAACTACATATTTGCCATGGCTTACAATGTAGTTGCCATTCCAGTTGCTGCCGGTGTTTTCTATCCTTTGATAGGGTTGAAGTTGCCACCTTGGATGGCTGGTGCTTGCATGGCTCTCTCTTCAATTAGTGTTGTTTGCTCTTCTTTGCTTCTTAGGACGTATAAAAAACCAAGTCTTACGAGTATACTAGAAATAACTGTAGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23854.p1 GENE.S_Transcript_23854~~S_Transcript_23854.p1 ORF type:complete len:1009 (+),score=244.40,E1-E2_ATPase|PF00122.16|1.6e-60,E1-E2_ATPase|PF00122.16|1.1e+03,E1-E2_ATPase|PF00122.16|7.4e+03,Hydrolase|PF00702.22|3.3e-44,HMA|PF00403.22|1.2e-13,HMA|PF00403.22|3.2e-13,HMA|PF00403.22|0.56,HAD|PF12710.3|1.7e+03,HAD|PF12710.3|8.3e-11 S_Transcript_23854:378-3404(+)
MAPSVKDLQLTSPRRHKKPVFSIGEDEDELENVGLLDDYDEESGKEGQGLFNPNPNAKRIHVSVTGMTCAACSNSVESALLAIDGVLKASVALLQNKADVIFDPDLVKDEDIKNAIEDAGFEAEILSEPTTSSSKPRKTMSGQFNIGGMTCAACVNSVEGILRELPGVTRAVVALTTNLGEVEYDPNVISKDDIVNAIEDAGFEASLVQSSEQDKILVEVNGVSGEIDAQSLESLLSQIKGVRQFRFDRASRELEVCFDPEVITSRSLVDGVEDASGGRYKLRVKSPFVRMTSKDSEESSKMFHLFTSSLFLSVPVFLIQVCPHVPVLYPFLLWRCGPFLMRDWLKWGLVSVVQFVVGKRFYVAAGKALRRGSTNMDVLVALGTSASYFYSVYALLYGAVTGFWSPTYFETSSMLITFVLLGKYLESLAKGKTSDAIKKLVELAPATALLLVKDKGGKCVDERDIDALLIQPGDLLKVLPGTKVPADGTVLWGSSYVNESMVTGESAPVLKEINAPVIGGTMNLHGVLHVQATKVGSDTVLSQIINLVETAQMSKAPIQKFADYIASVFVPTVVAMALLTLLGWYIGGVSGAYPQSWLPENGNYFVFSLMFAISVVVIACPCALGLATPTAVMVATGVGAKNGILIKGGDALESAQKIKYVIFDKTGTLTQGKATVTTAKVFTGIDLGEFLTLVASAEVSSEHPLAKAVVEYARHFHFFDPSETKDSLNDNKDSRYSGWLLDVSDFTAVPGRGVQCFIDAKRVLIGNRRLLIENGVTIPTHVESFVVELEESAKTGVLVACDDVLIGVLGVADPLKREAAVVVEGLEKMGIRPIMVTGDNLRTAQAVAKEVGIHDVRAEVMPAGKAEVICSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDVAIEAADYVLMRNNLEDVITAIDLSRKTFLRIRLNYIFAMAYNVVAIPVAAGVFYPLIGLKLPPWMAGACMALSSISVVCSSLLLRTYKKPSLTSILEITVE*

Click here to download the sequence:
Link to NCBI Protein BLAST