Transcript Information: S_Transcript_238546.p1


Annotated TAIR IDAT3G42170.1
Annotated Gene NameBED zinc finger ;hAT family dimerisation domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:14321838-14323928 | Forward length=696
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48563870867118
Replicate 20.24156338931586
Replicate 30.067309255779564
Condition 2: 8 Hour
Replicate 10.077829891668369
Replicate 20.16329816525348
Replicate 30.23338519275527
Condition 3: 24 Hour
Replicate 10.079725852155453
Replicate 20.082714640789589
Replicate 30.092051256952979


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238546.p1 GENE.S_Transcript_238546~~S_Transcript_238546.p1 ORF type:5prime_partial len:274 (-),score=25.73,Dimer_Tnp_hAT|PF05699.10|9.3e-19 S_Transcript_238546:369-1190(-)
TTTCCTAAAATTTATGCCATGGCAACTATTCTTGATCCATCCGTAAAATCGGTTGGTTTGTATAACTTAGTAGAGTTTTACTACAATAGCTTGGGGGTCCAATATAATGTTAATAATTATGTGGAAGAGTCTCTTGAATGTTTGCGTGAGTTATATACTCATTATGAGTCTACTAGGCCACCAATTACAAAGAATGATGTTGTTGGTCGTCCTCCAAGGGCACCAACATCATCATCTCATACTAGTCATAGCAAATTCATCTCTAGTCTTGTTAAAAAGACAAAAATCGTTGGTCATTTTCCTGAATTAGATGAATATTTGCAATTGCAATTTGATGTTGGTGATGATTTCAATATTCTTTATTGGTGGTCTAGCAAAGTGGGCTCTTTTCCTATTTCAGCAAGAATTGTGAAAGACGTTCTCGCAGTTCATGCCTCCACAGTTGCTTCCGAATCTGCTTTTAGTGCAGGTAAAAGAGTATTGAATCTCAAGAGAGCTAGCCTTGCTCCGGAATCAATCAAGATTTGTGTATGTAAGAAGGATTGGGATCGAGCGGAAAGACTCAACAGAGTGAGGAAATACAATATACCTCTTGCAAAAAAGATGGCGCAAGTTGAAGAAGAAACGGCCGAGGAGGATGATGAACCGTGGATGTTGATGGATGAATCAAAGGCAGAATTTGAATCAATGAGTGACCTTGAAAGTTTAAACCTCAGTCGAATGACGACTTTGTTTGTCATCTTTCTGAAGTGGACGTTGTTCGTAATTTTTTTGGGAATTTATTTTATTTTCATGGACTCTATTTTAATTTTTTTTTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238546.p1 GENE.S_Transcript_238546~~S_Transcript_238546.p1 ORF type:5prime_partial len:274 (-),score=25.73,Dimer_Tnp_hAT|PF05699.10|9.3e-19 S_Transcript_238546:369-1190(-)
FPKIYAMATILDPSVKSVGLYNLVEFYYNSLGVQYNVNNYVEESLECLRELYTHYESTRPPITKNDVVGRPPRAPTSSSHTSHSKFISSLVKKTKIVGHFPELDEYLQLQFDVGDDFNILYWWSSKVGSFPISARIVKDVLAVHASTVASESAFSAGKRVLNLKRASLAPESIKICVCKKDWDRAERLNRVRKYNIPLAKKMAQVEEETAEEDDEPWMLMDESKAEFESMSDLESLNLSRMTTLFVIFLKWTLFVIFLGIYFIFMDSILIFFL*

Click here to download the sequence:
Link to NCBI Protein BLAST