Transcript Information: S_Transcript_238760.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3034939380497
Replicate 21.1706786295824
Replicate 31.0538706333486
Condition 2: 8 Hour
Replicate 11.2185937324076
Replicate 20.82182301125526
Replicate 30.87003459612169
Condition 3: 24 Hour
Replicate 10.80246510781775
Replicate 20.74004282698277
Replicate 30.61768272012529


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238760.p1 GENE.S_Transcript_238760~~S_Transcript_238760.p1 ORF type:complete len:245 (+),score=43.48 S_Transcript_238760:746-1480(+)
ATGGATGGTGTCACCGACAGCCTATTGAATGAAGAGTCAAGGAGAAAGGAGCATAGGATCTCTGGTCAGTTAGAGGCCAATGTCATGGAGAATCGAGGAAGAAGTAAGACTCGAGGAAAGAGTAAGACTAGGGGTAGTGACAGGTCAAGAGGTCGGTCCAAGTCACGATCGAAAATCACATGCTTGTACTGTGGCAAGCCTGGCCACAAGAAATCTGAATTTCGAAGTTACAAGAGAGATCAAAAGAATGGATTTGTAAAACCCGACAAAAATGACAGTCCTAAGAAGAAAGAAGATAAGAGCACAACAACCGTGGCAACAAATGATCTAGATGATGTATTTCTCATTGGTGAAGACAATTATCTCAATGCCGACGATGATTGCTCATGGATTGTTGATTCAAGTGCCTCCTTTCACGTCACCCCACATCAAGAATTTTTCTCATCATACCAGGTTGGTGATTTTGGTACCGTGAAGATGGAAAATCAAGTTTCAGGCAAGATCGAGGGGATAGGTAATGTCAATCTTGTAACAATCACAGGATGTGAACTATTGTTGATGGATATGAGACATGTTCCAGACATGTGTCTCAATCTCATCTCAGTTGGGAAGCTAGATGAGGCTAGGTATATGAATAACTTCGGTGCAGAAAAATGGAAACTCACAAGAAGTAGCATTATTGTGGCTCGAGGAAGAAAAGAAAGCTCGTTGTATGTTATACAAGCCAAGCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238760.p1 GENE.S_Transcript_238760~~S_Transcript_238760.p1 ORF type:complete len:245 (+),score=43.48 S_Transcript_238760:746-1480(+)
MDGVTDSLLNEESRRKEHRISGQLEANVMENRGRSKTRGKSKTRGSDRSRGRSKSRSKITCLYCGKPGHKKSEFRSYKRDQKNGFVKPDKNDSPKKKEDKSTTTVATNDLDDVFLIGEDNYLNADDDCSWIVDSSASFHVTPHQEFFSSYQVGDFGTVKMENQVSGKIEGIGNVNLVTITGCELLLMDMRHVPDMCLNLISVGKLDEARYMNNFGAEKWKLTRSSIIVARGRKESSLYVIQAKL*

Click here to download the sequence:
Link to NCBI Protein BLAST