Transcript Information: S_Transcript_238768.p1


Annotated TAIR IDAT5G11280.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3597321-3598347 | Forward length=209
E-Value1E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0060051182297
Replicate 22.3282340739086
Replicate 30.74141652597389
Condition 2: 8 Hour
Replicate 10.7501393578891
Replicate 21.0117921495354
Replicate 30.642688872512
Condition 3: 24 Hour
Replicate 10.658639703234
Replicate 20.68333100230193
Replicate 31.3941833590768


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238768.p1 GENE.S_Transcript_238768~~S_Transcript_238768.p1 ORF type:complete len:199 (+),score=34.21 S_Transcript_238768:264-860(+)
ATGGGTGCTTCTTGTTTTCGTTCTTGTTCTCGCAGATGGGCAAACACCATTTCTTCCATTGCTTCTCGCCTTTTTTTCCTTCTCATCATCTTTCAAGTCCCTCTTTTCAGGGTCCCATGCAGAAGTGGAATATGCATAAACCCAATTCAGATAACATCTTGCCAATTGATTGCAAGTGAAATATTGCCAGTTCCTTTGGTGAAGATCATTTTATACCCTGGTGCTATTGTTAATGCTCTGATCCAGGGTACAAACCTCCCCAAGTATGGAAATCTATTGGATATATATAACCTCACCCATGTCAAAGATGTCCCTGCAGCCATTGATCTCTGGCGCTTAGAGATTTTAGCAGGGAGCTACTTCTCTGTGGCAGGAGCAGTGCTTGGTCTATTGAAGCAAGTTAGGCAAAAAGCCACTTATCTACAATCAACAGGAGCTGTGCAAGTTTCTCCAGTCATGTTAATTGCTCTCTTCACAGCCCTGTCATCTGTGAAAGGAGATGTGAAGGAGATCATACAAAGCTTTCGAGCTCACCAAATGGCTGTTGGGAAAAGACGGGATAATAGCGGAAGACCTTTTCCATCTTTGTGTGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238768.p1 GENE.S_Transcript_238768~~S_Transcript_238768.p1 ORF type:complete len:199 (+),score=34.21 S_Transcript_238768:264-860(+)
MGASCFRSCSRRWANTISSIASRLFFLLIIFQVPLFRVPCRSGICINPIQITSCQLIASEILPVPLVKIILYPGAIVNALIQGTNLPKYGNLLDIYNLTHVKDVPAAIDLWRLEILAGSYFSVAGAVLGLLKQVRQKATYLQSTGAVQVSPVMLIALFTALSSVKGDVKEIIQSFRAHQMAVGKRRDNSGRPFPSLCD*

Click here to download the sequence:
Link to NCBI Protein BLAST