Transcript Information: S_Transcript_238772.p1


Annotated TAIR IDAT5G11280.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3597321-3598347 | Forward length=209
E-Value2E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.6374726624718
Replicate 30.79246131609221
Condition 2: 8 Hour
Replicate 10.083302305926301
Replicate 20
Replicate 30.16653005941392
Condition 3: 24 Hour
Replicate 10.68265260908107
Replicate 22.1247323352826
Replicate 31.0837597205323


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238772.p1 GENE.S_Transcript_238772~~S_Transcript_238772.p1 ORF type:complete len:256 (+),score=44.17 S_Transcript_238772:264-1031(+)
ATGGGTGCTTCTTGTTTTCGTTCTTGTTCTCGCAGATGGGCAAACACCATTTCTTCCATTGCTTCTCGCCTTTTTTTCCTTCTCATCATCTTTCAAGTCCCTCTTTTCAGGGTCCCATGCAGAAGTGGAATATGCATAAACCCAATTCAGATAACATCTTGCCAATTGATTTCAAGTGAAATATTGCCAGTTGCTTTGGTGAAGGTCATTTTATACCCTGGTGCTATTGTTAATGCTCTGATCCAGGGTACAAACCTCCCCAAGTATGGAAATCTATTGGATATATATAACCTCACCCATGTCAAAGATGTCCCTGCAGCCATTGATCTCTGGCGCTTAGAGATATTAGCAGGGAGCTATTTCTCTGTGGCAGGAGCACTGCTTGGTCTGTTGAAGCACGGTAGGCTAAGCTCATTTGGCATGCTGCTACTATTATGGGGCTTGGTCAAGGAAGTCCTTAGGCAAAAAGCCACTCATCTAGAATCATCAGGAGCTGTGCAAGTTTCTCCAGTCATGTTAATTGCTCTCTTCACAGCCCTGTCATCTGTGAAAGGAGATGTGAAGGAGATCATACAAAGCTTTCGAGCTCACCAAATGGCGAAAAGAGCGACAGAATTCCATGAACATATCAAGAAGAGGAGGAAGGAGAGGGAAATGAAGAGGCTTGAATGGACTGTCAATTATGTTAACAGTTCTAAAGCTCCTAGGAACACCAAAGTTGCACAAGAAGGAATTAATCAAGACTTCTCGGTTTCCCCCTCTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238772.p1 GENE.S_Transcript_238772~~S_Transcript_238772.p1 ORF type:complete len:256 (+),score=44.17 S_Transcript_238772:264-1031(+)
MGASCFRSCSRRWANTISSIASRLFFLLIIFQVPLFRVPCRSGICINPIQITSCQLISSEILPVALVKVILYPGAIVNALIQGTNLPKYGNLLDIYNLTHVKDVPAAIDLWRLEILAGSYFSVAGALLGLLKHGRLSSFGMLLLLWGLVKEVLRQKATHLESSGAVQVSPVMLIALFTALSSVKGDVKEIIQSFRAHQMAKRATEFHEHIKKRRKEREMKRLEWTVNYVNSSKAPRNTKVAQEGINQDFSVSPSS*

Click here to download the sequence:
Link to NCBI Protein BLAST