Transcript Information: S_Transcript_238776.p1


Annotated TAIR IDAT5G11280.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3597321-3598347 | Forward length=209
E-Value7E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49056223474987
Replicate 21.1183902540676
Replicate 30.33995826882213
Condition 2: 8 Hour
Replicate 10.49136844048694
Replicate 20.20619215336154
Replicate 30.29468913739606
Condition 3: 24 Hour
Replicate 11.0066766585527
Replicate 20.522207640008
Replicate 31.394767432541


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238776.p1 GENE.S_Transcript_238776~~S_Transcript_238776.p1 ORF type:complete len:217 (+),score=38.22 S_Transcript_238776:245-895(+)
ATGAACAAACACAGAAACAATGGGTGCTTCTTGTTTTCGTTCTTGTTCTCGCAGATGGGCAAACACCATTTCTTCCATTGCTTCTCGCCTTTTTTTCCTTCTCATCATCTTTCAAGTCCCTCTTTTCAGGGTACAAACCTCCCCAAGTATGGAAATCTATTGGATATATATAACCTCACCCATGTCAAAGATGTCCCTGCAGCCATTGATCTCTGGCGCTTAGAGATATTAGCAGGGAGCTATTTCTCTGTGGCAGGAGCACTGCTTGGTCTGTTGAAGCACGGTAGGCTAAGCTCATTTGGCATGCTGCTACTATTATGGGGCTTGGTCAAGGAAGTCCTTAGGCAAAAAGCCACTCATCTAGAATCATCAGGAGCTGTGCAAGTTTCTCCAGTCATGTTAATTGCTCTCTTCACAGCCCTGTCATCTGTGAAAGGAGATGTGAAGGAGATCATACAAAGCTTTCGAGCTCACCAAATGGCGAAAAGAGCGACAGAATTCCATGAACATATCAAGAAGAGGAGGAAGGAGAGGGAAATGAAGAGGCTTGAATGGACTGTCAATTATGTTAACAGTTCTAAAGCTCCTAGGAACACCAAAGTTGCACAAGAAGGAATTAATCAAGACTTCTCGGTTTCCCCCTCTAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238776.p1 GENE.S_Transcript_238776~~S_Transcript_238776.p1 ORF type:complete len:217 (+),score=38.22 S_Transcript_238776:245-895(+)
MNKHRNNGCFLFSFLFSQMGKHHFFHCFSPFFPSHHLSSPSFQGTNLPKYGNLLDIYNLTHVKDVPAAIDLWRLEILAGSYFSVAGALLGLLKHGRLSSFGMLLLLWGLVKEVLRQKATHLESSGAVQVSPVMLIALFTALSSVKGDVKEIIQSFRAHQMAKRATEFHEHIKKRRKEREMKRLEWTVNYVNSSKAPRNTKVAQEGINQDFSVSPSS*

Click here to download the sequence:
Link to NCBI Protein BLAST