Transcript Information: S_Transcript_238820.p1


Annotated TAIR IDAT1G08070.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)OTP82
Annotation TypeHomolog
Chromosome Positionchr1:2514374-2516599 | Reverse length=741
E-Value4E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.9889966675236
Replicate 20.52175515845474
Replicate 30.7476784898757
Condition 2: 8 Hour
Replicate 11.801130938947
Replicate 22.4941588010506
Replicate 32.3764289559608
Condition 3: 24 Hour
Replicate 10.66420253856536
Replicate 20.53596851700822
Replicate 30.68167687581395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238820.p1 GENE.S_Transcript_238820~~S_Transcript_238820.p1 ORF type:internal len:296 (+),score=33.81,PPR|PF01535.16|0.026,PPR|PF01535.16|81,PPR|PF01535.16|0.009,PPR|PF01535.16|5.6e-09,PPR|PF01535.16|0.47,PPR_2|PF13041.2|0.00045,PPR_2|PF13041.2|4.1,PPR_2|PF13041.2|1.6e-07,PPR_2|PF13041.2|0.26,PPR_1|PF12854.3|0.88,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|1.6e-06,PPR_1|PF12854.3|10,PPR_3|PF13812.2|13,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|2,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|47 S_Transcript_238820:3-887(+)
TCAAGGCCTCCAGAATTCTATAAACAGTTCCCGCCAAACTTAGAAAAACATGGTAAAATGAACGTTGGGCAAAATCTTTTGAAACGAGGAACCTCCTTCCTCTATTTCTCTTCCCCAAAACTCACCAAATCTTACAAAACCCTCTCCAAATCATCACCAAAACTCTGGTCCAATCTAAAATTCGGATCAACCCCAGATGTTGAATTCAACAATAAAGACCTCGCATTGAACCCAAATCATCCAATTCTTGTAAAACTAGAAACATGCTCTAATTTAGCTCAGTTCAACCAAATTCAAGCTCAAATCATTGTCCTTGGCCTCTTTAATCATTCCCTTGTCGCAGGCCGTGCCATAAAGAAACTATGTTTACTTCCCAACTCCTTAAACCTCACCATCTCTCTCCTCGAAAAGCTCGAAAACCCTGATGCGTTTATGTGTAATACCATTATTAGGAGCTATGTAAATGAGGGTGACCCAGATGGTGCTTTAGTGTTTTATTATCGTTTTGTGATTGGTGGATGTATTGGATGTAATCATTATACTTATCCTTTGGTAATTAAGGTTTGTGCTGATCTTGGATTGGTGTTAGATGGGGAAAAGGTGCATGGTAGGGCTTTAAAATCTGGGTTTGATTTGGATCTGTATGTTAGGAACTCATTGATTCGTATGTACTCGGTTTTTGGAAGAGTATGGGATGCAGAGAAGGTGTTTGATGAAAGTTTTGAATCAGATTTGGTGACTTGGAATACTATGATTGACGGGTATGTCAAGAATGGGCAAGCGGGTCTCGCACGTAACATGTTCGATGAAATGCCTGAGAGAGATTCATTCACTTGGAATTCTATGCTTGCAGGCTATGTCGGGATTGGAGATATAGATGCAGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238820.p1 GENE.S_Transcript_238820~~S_Transcript_238820.p1 ORF type:internal len:296 (+),score=33.81,PPR|PF01535.16|0.026,PPR|PF01535.16|81,PPR|PF01535.16|0.009,PPR|PF01535.16|5.6e-09,PPR|PF01535.16|0.47,PPR_2|PF13041.2|0.00045,PPR_2|PF13041.2|4.1,PPR_2|PF13041.2|1.6e-07,PPR_2|PF13041.2|0.26,PPR_1|PF12854.3|0.88,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|1.6e-06,PPR_1|PF12854.3|10,PPR_3|PF13812.2|13,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|2,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|47 S_Transcript_238820:3-887(+)
SRPPEFYKQFPPNLEKHGKMNVGQNLLKRGTSFLYFSSPKLTKSYKTLSKSSPKLWSNLKFGSTPDVEFNNKDLALNPNHPILVKLETCSNLAQFNQIQAQIIVLGLFNHSLVAGRAIKKLCLLPNSLNLTISLLEKLENPDAFMCNTIIRSYVNEGDPDGALVFYYRFVIGGCIGCNHYTYPLVIKVCADLGLVLDGEKVHGRALKSGFDLDLYVRNSLIRMYSVFGRVWDAEKVFDESFESDLVTWNTMIDGYVKNGQAGLARNMFDEMPERDSFTWNSMLAGYVGIGDIDAA

Click here to download the sequence:
Link to NCBI Protein BLAST