Transcript Information: S_Transcript_238821.p1


Annotated TAIR IDAT1G13410.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4601526-4603174 | Forward length=474
E-Value3E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.75107368706433
Replicate 30.78479728015322
Condition 2: 8 Hour
Replicate 10.18149268355007
Replicate 20.85679420322357
Replicate 30.63494014142498
Condition 3: 24 Hour
Replicate 10.83661255921425
Replicate 20.38576700555485
Replicate 30.75129493972686


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238821.p1 GENE.S_Transcript_238821~~S_Transcript_238821.p1 ORF type:internal len:235 (-),score=43.54,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|3.2e-05,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|2.1e+03,PPR|PF01535.16|0.00024,PPR|PF01535.16|2.4e-08,PPR|PF01535.16|0.43,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|1.8e-05,PPR_2|PF13041.2|2.8e-08,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|1.9e-09,PPR_2|PF13041.2|3e+02,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|0.0003,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|0.8,PPR_3|PF13812.2|1.4,PPR_1|PF12854.3|0.003,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|17,PPR_1|PF12854.3|2.3,PPR_1|PF12854.3|0.83,PPR_1|PF12854.3|6.2e+03 S_Transcript_238821:2-703(-)
GAGAGAGATTCATTCACTTGGAATTCTATGCTTGCAGGCTATGTCGGGGTTGGATATATAGATGCAGCCCTGGAATTGTTTGGGTCAATGCCTCATAGGGATGTTGTTTCTTGGAATTGTTTGCTTGAAGGGTGTGCTAGTATAGGGGATATCTCGGCTGCTCATGAGTGTTTTGATCGCATGCCTGAGCATAATATGGTGTCCTGGAATACTATGTTGGCCCTTTATGTTCGATGTAAGAAGTATCACGAGTGTTTGGGATTGTTTGATAGGATGATTCAAGAAGGTGAGACTCAGCCCAATGAGGCTACTCTTGTGAGTGTCCTAACAGCATGTGGTTATTTGGGTAGTTTAGATCAGGGTAAGTGGATCCATCAATATATAGAAAGCAATAGGAAGATTAAGCTTGATATGTTGCTTTCTACAGCTTTGTTAACAATGTATGCAAAGTGTGGGGATATGGATTTGGCTAAAAAGGTCTTCAGTAGTATGCATGAGAAAAGTGTTGTGTCATGGAATTCTATGATTATGGCCTATGGAACACATGGTCTTGGAGAAAAATCACTTGAGATATTTCTCGAGATGGAGAGAAGTGGACAAAAACCAAGTGATGCCACCTTTGTGTGTGTCTTAGCTGCGTGTGCTCATTCAGGAATGGTTTTGGAGGGTTGGTGGTATTTTGATGTCATGCATAGAGTTTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238821.p1 GENE.S_Transcript_238821~~S_Transcript_238821.p1 ORF type:internal len:235 (-),score=43.54,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|3.2e-05,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|2.1e+03,PPR|PF01535.16|0.00024,PPR|PF01535.16|2.4e-08,PPR|PF01535.16|0.43,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|1.8e-05,PPR_2|PF13041.2|2.8e-08,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|1.9e-09,PPR_2|PF13041.2|3e+02,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|0.0003,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|0.8,PPR_3|PF13812.2|1.4,PPR_1|PF12854.3|0.003,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|17,PPR_1|PF12854.3|2.3,PPR_1|PF12854.3|0.83,PPR_1|PF12854.3|6.2e+03 S_Transcript_238821:2-703(-)
ERDSFTWNSMLAGYVGVGYIDAALELFGSMPHRDVVSWNCLLEGCASIGDISAAHECFDRMPEHNMVSWNTMLALYVRCKKYHECLGLFDRMIQEGETQPNEATLVSVLTACGYLGSLDQGKWIHQYIESNRKIKLDMLLSTALLTMYAKCGDMDLAKKVFSSMHEKSVVSWNSMIMAYGTHGLGEKSLEIFLEMERSGQKPSDATFVCVLAACAHSGMVLEGWWYFDVMHRVY

Click here to download the sequence:
Link to NCBI Protein BLAST