Transcript Information: S_Transcript_238822.p1


Annotated TAIR IDAT5G19020.1
Annotated Gene Namemitochondrial editing factor 18
Annotated Gene Symbol(s)MEF18
Annotation TypeOrtholog
Chromosome Positionchr5:6352771-6354828 | Reverse length=685
E-Value1.7E-262
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8636555486821
Replicate 21.6995146017694
Replicate 30.95571601553672
Condition 2: 8 Hour
Replicate 13.8827741473772
Replicate 24.1673051387726
Replicate 33.7914742938832
Condition 3: 24 Hour
Replicate 11.3461832963391
Replicate 21.4918755519444
Replicate 31.8015746003654


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238822.p1 GENE.S_Transcript_238822~~S_Transcript_238822.p1 ORF type:complete len:714 (+),score=120.40,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|8.2e-10,PPR_2|PF13041.2|0.08,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|7.9e-07,PPR_2|PF13041.2|7.5e+02,PPR_2|PF13041.2|6.1e-07,PPR_2|PF13041.2|9.1e-10,PPR_2|PF13041.2|22,PPR_2|PF13041.2|1.6e-06,PPR_2|PF13041.2|0.078,PPR_2|PF13041.2|3.6,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|3.7e+02,PPR|PF01535.16|0.13,PPR|PF01535.16|6.5e-10,PPR|PF01535.16|6.8e-06,PPR|PF01535.16|2.8e+02,PPR|PF01535.16|0.024,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|0.0004,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|0.81,PPR|PF01535.16|2.8,PPR|PF01535.16|0.18,PPR|PF01535.16|0.039,PPR|PF01535.16|4.9e+02,PPR|PF01535.16|29,PPR_1|PF12854.3|5.4,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|0.0092,PPR_1|PF12854.3|26,PPR_1|PF12854.3|0.09,PPR_1|PF12854.3|3.4e-07,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|4.6e-06,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|62,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|0.044,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|1.3e+02,PPR_3|PF13812.2|68,PPR_3|PF13812.2|2.5e-06,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|0.069,PPR_3|PF13812.2|51,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|0.044,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|5.7,PPR_3|PF13812.2|96,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|71,TPR_19|PF14559.2|32,TPR_19|PF14559.2|8e+03,TPR_19|PF14559.2|6.1,TPR_19|PF14559.2|4.8e+02,TPR_19|PF14559.2|7.2e+02,TPR_19|PF14559.2|5.4e+02,TPR_19|PF14559.2|3 S_Transcript_238822:132-2273(+)
ATGTACAAACCTCTCAGACACAAAACCCTGCTCCGATTGCTAACGCCATTTTCTTCTTCCTCTTCTCCAATTCCCTCATGGGCTTCTTCTTTTTCTACCAAATCTTCTCAAAATGTAGCCAACCCAAAAACCCATCTCATAAACTTCTTCAATTCTCTGAACAATCAGAATCCAAACCCAAAGTCAAATGGAGGGCCCAAATCTGATCATGAGCTTGAATTAGTTTCTGCCCTGAAATCCTGTTCAACCCTTAAGGCAGTTTCTCAAGGGCAACAAGTACATTCACTTATCTTGAAAACAGGTCTTGACTCCAATATATTTATACAGAACAGTTTGATTAGTATGTATGCTAAATGTGGCCAAATGGGTGTTGCCCAGATGTTATTTGATATGAGTTCTGGGTTTGATGTGGTATCTTGGAATATTATGTTGAGTGCTTATGTCAAATGTGGTCGGTTAAGCGATGCCCGCCAACTGTTCGATGAAATGCCTGAGAGAGGTTGTGTTGCTTATACCACTATGATAATTGGTTTGGCTCAGAATGATAGGTGGGGTCAAGCTATTGAAGTTTTTAAGGATATGAGGGTTGCGGGGGTTACTCCGAATGAGGTGACAATGGCTAGTGTCATTTCGTCGTACACTAATGTAGGTAGGATTATGAGTTCTAGAGAGTTGCATTCATTGGCTATCAAACTTGGGCTTAAGGATTTTGTTGTTGTTGCGACTAATCTGTTGCATATATACTGTATTTCTTCGCGTTTAGGTGATGCAAGGAGGTTATTTGATAAGATGCCAGAGAAGAATGTAGTTTCTTGGAATGTGATGTTGAATGGATATTCAAAAAATGGTCTACTTGATAAGGCCAGAGAGTTGTTTGATAAGATTCCTGAGAAGGATGTGGTGTCTTGGGGCACCATTATTGATGCGTATGTACAAGTAGATAGATTGGTTGAAGCTTTGATGTTGTATCGTGCTATGTTGTGTGCAGGATTGAGGCCTAATGATGTTATGATTGTGGATTTAGTCTCAGCTTGTGGACGAAGAATGGCAATTGGTGAGGGTCAGCAACTGCATTCTACCGCAGTAAAGATTGGCTTTGACTGCTTTGATTTTGTTCAGTCAACCATAATTCACTTCTATGCAACTTGTCGGATGATGGACCAGGCTTGTTCACAATTCGTGGTGGCGAGTAAAGCCCATATTGCATCATGGAATGCCCTTATCGCAGGATTTGTTAAGAATGGAATGGTTAATCAAGCTAGGCAAGTTTTCGACGAGATGCCTGAAAGAGATGTTTTCTCTTGGAGCTCCATTATTTCTGGTTATTCGCAGGTTGGACAAGCCAGTATGGCTTTAGGGTTGTTCCAAAGTATGGTGGCTTCCGGTATCCAGCCAAATGAGATCACTATGGTCAGTGTCCTTTCTGCGATTGCGACTTTAGGTACATTAAAAGATGCGAAGTGGGCCCATGAATATATCAGAAGGAACTCTATTCCTCTTAATGACAATTTAACTGCAGCACTTGTTGATGTTTATGCCAAATGTGGGAGCATTAGTAACGCCTTAGATGTGTTTAATCAAGTTCAAGTAAGATTCACTACTGTCTCACCATGGAATGCAATTATATGTGGATTGGCAATGCATGGGCATGCTACTTTGGCATTAACGAAATTTGAAGACTTGGAAAGGACTGGCATACGACCCAATTCAATCACTTTTATTGGTGTCCTGACAGCTTGTTGCCATGCTGGGCTGGTAGAAGCAGGAGAAATTTTTTTTGACAGGATGAAGAATGTGTATAAGATAGAACCCAGCATTAAGCATTATGGTTGTATGGTTGACCTCCTAGGTAGAACTGGACGTTTGAAAGAAGCTGAGAAAATGATAATGAGCATGCCAGTGGAGGCAGATGTGGTTATATGGGGTACTTTACTTGCAGCTTGTAGAACACATGGCAATGTGGAGATAGGAGAACTAGCAGCTAAAAGGTTGGCGAACTTGGATACATCTCATGGGGCAAGTAGGGTTTTGCTGTCCAACCTTTATGCAGATGCAGGAAGATGGGATGATGCACTTGTGGTTAGAAAAGCCATGCAAGGTCAGCCGATGGTAAGGTTGCCTGGTGCTAGTGGCGTTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238822.p1 GENE.S_Transcript_238822~~S_Transcript_238822.p1 ORF type:complete len:714 (+),score=120.40,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|8.2e-10,PPR_2|PF13041.2|0.08,PPR_2|PF13041.2|2.1e-06,PPR_2|PF13041.2|7.9e-07,PPR_2|PF13041.2|7.5e+02,PPR_2|PF13041.2|6.1e-07,PPR_2|PF13041.2|9.1e-10,PPR_2|PF13041.2|22,PPR_2|PF13041.2|1.6e-06,PPR_2|PF13041.2|0.078,PPR_2|PF13041.2|3.6,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|3.7e+02,PPR|PF01535.16|0.13,PPR|PF01535.16|6.5e-10,PPR|PF01535.16|6.8e-06,PPR|PF01535.16|2.8e+02,PPR|PF01535.16|0.024,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|0.0004,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|0.81,PPR|PF01535.16|2.8,PPR|PF01535.16|0.18,PPR|PF01535.16|0.039,PPR|PF01535.16|4.9e+02,PPR|PF01535.16|29,PPR_1|PF12854.3|5.4,PPR_1|PF12854.3|2.7e-07,PPR_1|PF12854.3|0.0092,PPR_1|PF12854.3|26,PPR_1|PF12854.3|0.09,PPR_1|PF12854.3|3.4e-07,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|4.6e-06,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|62,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|0.044,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|1.3e+02,PPR_3|PF13812.2|68,PPR_3|PF13812.2|2.5e-06,PPR_3|PF13812.2|0.3,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|0.069,PPR_3|PF13812.2|51,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|0.044,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|5.7,PPR_3|PF13812.2|96,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|71,TPR_19|PF14559.2|32,TPR_19|PF14559.2|8e+03,TPR_19|PF14559.2|6.1,TPR_19|PF14559.2|4.8e+02,TPR_19|PF14559.2|7.2e+02,TPR_19|PF14559.2|5.4e+02,TPR_19|PF14559.2|3 S_Transcript_238822:132-2273(+)
MYKPLRHKTLLRLLTPFSSSSSPIPSWASSFSTKSSQNVANPKTHLINFFNSLNNQNPNPKSNGGPKSDHELELVSALKSCSTLKAVSQGQQVHSLILKTGLDSNIFIQNSLISMYAKCGQMGVAQMLFDMSSGFDVVSWNIMLSAYVKCGRLSDARQLFDEMPERGCVAYTTMIIGLAQNDRWGQAIEVFKDMRVAGVTPNEVTMASVISSYTNVGRIMSSRELHSLAIKLGLKDFVVVATNLLHIYCISSRLGDARRLFDKMPEKNVVSWNVMLNGYSKNGLLDKARELFDKIPEKDVVSWGTIIDAYVQVDRLVEALMLYRAMLCAGLRPNDVMIVDLVSACGRRMAIGEGQQLHSTAVKIGFDCFDFVQSTIIHFYATCRMMDQACSQFVVASKAHIASWNALIAGFVKNGMVNQARQVFDEMPERDVFSWSSIISGYSQVGQASMALGLFQSMVASGIQPNEITMVSVLSAIATLGTLKDAKWAHEYIRRNSIPLNDNLTAALVDVYAKCGSISNALDVFNQVQVRFTTVSPWNAIICGLAMHGHATLALTKFEDLERTGIRPNSITFIGVLTACCHAGLVEAGEIFFDRMKNVYKIEPSIKHYGCMVDLLGRTGRLKEAEKMIMSMPVEADVVIWGTLLAACRTHGNVEIGELAAKRLANLDTSHGASRVLLSNLYADAGRWDDALVVRKAMQGQPMVRLPGASGVA*

Click here to download the sequence:
Link to NCBI Protein BLAST