Transcript Information: S_Transcript_23885.p1


Annotated TAIR IDAT1G54130.1
Annotated Gene NameRELA/SPOT Homolog 3
Annotated Gene Symbol(s)RSH3, AT-RSH3, ATRSH3
Annotation TypeOrtholog
Chromosome Positionchr1:20211177-20213761 | Forward length=715
E-Value8.9e-313
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 144.541367613502
Replicate 255.187874159274
Replicate 355.43152890113
Condition 2: 8 Hour
Replicate 126.163924254634
Replicate 226.194489443714
Replicate 326.032799876112
Condition 3: 24 Hour
Replicate 158.834329065004
Replicate 254.913717124763
Replicate 351.963063473285


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23885.p1 GENE.S_Transcript_23885~~S_Transcript_23885.p1 ORF type:complete len:714 (+),score=122.76,HD_4|PF13328.2|1.6e-45,RelA_SpoT|PF04607.13|1.2e-34,HD|PF01966.18|1.6e-06,HD|PF01966.18|6.2e+03 S_Transcript_23885:442-2583(+)
ATGGCGGTTTCAACAATTGCTATGTACGCGAGTCCACCGAGCAGCGTATGTTCGACACCTTATCCATGCTACGACTTCGATCTGAACGGCAGATCATCGGCGTCAACCGCCGCCACGTCATCACCGTCAACCTCTCAGAGGCCGTCGGCGATGATAGGCGGCTTGTCGTGTCTCCTCAAGCACTCTCAAACTCATCATCCATCAAGCGAACCAGAACGAGGTGATGATCATCACTTGAGCAGCTCATTTCGGTACTCAAGCTGCTCGCCGTTGAGCTCTTCGCTGTCGAAGCGAGACCAGAGCCCCGTCTCAGTCTTGCCGGGCCCGGTCTCTGTCTCCAGTAGCGCTTCTCCAATGCGAGCTGCTTCGGGGTTGTTCAATGGGTTTGTGAGGAACAGTTTTAGTAGTAATGGGAATGGATTAGCGTCGGGTTTCGATTATGATTTGTCGAGCTTTCGGTTGAATAGTTGCTCGTCGCTTGATGTAGAGGTGGAGGTGGATGCGGAGGAGCTTACTTTTAATATGGAGGATAATAGTAACAGTAATTTTGCAAGTGGTGGGAATGGTGTAGAGGAGTTGCTTGCAAGTGCTAGAAGAAGGCATAAGATATTTTTTGAGGATTTTGTTGTCAGGGCTTTCTATGAGGCTGAAAAGGCTCACAGAGGCCAGGTGAGAGCAAGTGGACATCCATATTTGCAACACTGTGTGGAGACTGCCGTGTTGTTGGCTACGATTGGAGCTAATTCCACTGTGGTTGCTGCTGGGCTGTTACATGACACCATTGATGATTCTTTTGTGACTTATGATTATATTCTCAGTATATTTGGACCTGGGGTGGCTGATTTGGTTCATGGGGTGTCTAAGCTGAGTCACTTGAGCAAGCTTGCACGTGAAAATAATACCGCAAACAAAACCATTGAAGCAGATCGGCTGCATACCATGTTTCTCGCCATGGCAGATGCAAGAGCTGTCTTGATAAAATTGGCAGATAGATTGCATAATATGATGACACTAGAAGCTTTGCCTTTGCACAAACAGCAGAGGTTTGCAAAGGAAACACTGGAGATATTTGCACCTTTGGCTAACAGACTAGGCATCTCCACTTGGAAAGAGCAACTAGAGAATTTGTGTTTTAAGCATTTACACCCAAATCAGCATGATGAACTCTCCTCCAAGCTTTTGAAGTCATTTGATGAAGCAATGGTCACATCAGCTATAGAGAAACTTGAACAGGCTCTGAAGGCTGAAAACATATCATACTGTGACTTGTCTGGTCGTCACAAAAGCTTATATAGCATTTATCGCAAAATGTTGAAGAAGAAGCTGACAATGGACCAGGTTCACGATATTCATGGCTTGCGTTTGATTGTTGAAGATGAAGATGACTGTTTTGGAGCACTAAAAGTTGTTCATAAGTTGTGGTCTGAAGTTCCTGGGAAGATGAAGGACTATATTCATTGTCCAAAGTGCAATGGGTACCAATCTCTTCATACTGTTGTGGTTGGTGAGGGAATGGTTCCACTCGAAGTTCAAATCCGTACCAAGGAAATGCATTTGCAGGCAGAGTATGGGTTTGCTGCTCACTGGAGGTACAAGGAAGATGATTGTAGGCACTCATCTTTTGTACTTCAAATGGTTGAATGGGCTAGATGGGTTGTAACTTGGCATTGTGAAACAATGAACAAGGATCCTTCATTAGTCGCCAGTGCTGATTCCATCAAGCCACCCTGTAAATTCCCTACTCATTCTGAAGGCTGTCTGTATTCATACCTGCCTCGTTGTAATCAGGACGGACCAGTGTTTGTCATCTTGATTGACAATGACAAGATGTCTGTTCAAGAATTTCCTGCAAACTCAACTATGATGGACCTGTTAGAGTTTACTGGCCATGGTAGCCCTCGTTGGACGCCATATGGTTTCCCTGTGAAGCAGGAGCTGAGACCCCGTCGTAACCGCGAGCCTGTGAATGATCCAACTTGCAAGTTGAAGATGGGAGATGTGATCGAGCTGACCCCGACCATACCCGACAAGTCGCTCACTGAGTACAGGGAAGAGATACAGCGGATGTACAACAGGGGTCTGTCAGTGTCAACTCCAAGCACTGCTCCAGCAACTGCTAGAATGGTTGGCTGGACAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23885.p1 GENE.S_Transcript_23885~~S_Transcript_23885.p1 ORF type:complete len:714 (+),score=122.76,HD_4|PF13328.2|1.6e-45,RelA_SpoT|PF04607.13|1.2e-34,HD|PF01966.18|1.6e-06,HD|PF01966.18|6.2e+03 S_Transcript_23885:442-2583(+)
MAVSTIAMYASPPSSVCSTPYPCYDFDLNGRSSASTAATSSPSTSQRPSAMIGGLSCLLKHSQTHHPSSEPERGDDHHLSSSFRYSSCSPLSSSLSKRDQSPVSVLPGPVSVSSSASPMRAASGLFNGFVRNSFSSNGNGLASGFDYDLSSFRLNSCSSLDVEVEVDAEELTFNMEDNSNSNFASGGNGVEELLASARRRHKIFFEDFVVRAFYEAEKAHRGQVRASGHPYLQHCVETAVLLATIGANSTVVAAGLLHDTIDDSFVTYDYILSIFGPGVADLVHGVSKLSHLSKLARENNTANKTIEADRLHTMFLAMADARAVLIKLADRLHNMMTLEALPLHKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLHPNQHDELSSKLLKSFDEAMVTSAIEKLEQALKAENISYCDLSGRHKSLYSIYRKMLKKKLTMDQVHDIHGLRLIVEDEDDCFGALKVVHKLWSEVPGKMKDYIHCPKCNGYQSLHTVVVGEGMVPLEVQIRTKEMHLQAEYGFAAHWRYKEDDCRHSSFVLQMVEWARWVVTWHCETMNKDPSLVASADSIKPPCKFPTHSEGCLYSYLPRCNQDGPVFVILIDNDKMSVQEFPANSTMMDLLEFTGHGSPRWTPYGFPVKQELRPRRNREPVNDPTCKLKMGDVIELTPTIPDKSLTEYREEIQRMYNRGLSVSTPSTAPATARMVGWTS*

Click here to download the sequence:
Link to NCBI Protein BLAST