Transcript Information: S_Transcript_238862.p1


Annotated TAIR IDAT2G28230.1
Annotated Gene NameTATA-binding related factor (TRF) of subunit 20 of Mediator complex
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:12037855-12039009 | Reverse length=219
E-Value1.1E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.130643781234
Replicate 210.496833798289
Replicate 39.2619908085042
Condition 2: 8 Hour
Replicate 113.246167553814
Replicate 211.432310318098
Replicate 312.582923255804
Condition 3: 24 Hour
Replicate 19.4308307580539
Replicate 29.3850144853597
Replicate 38.6666055665157


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238862.p1 GENE.S_Transcript_238862~~S_Transcript_238862.p1 ORF type:complete len:227 (+),score=32.81,Med20|PF08612.7|1.2e-39 S_Transcript_238862:657-1337(+)
ATGTTCATCTTTCTGCCTGTATCCTGTAGGATTCTGCACTGGCATCCTAATGCTGGTGCTACAGTGAATACTCAGATAATGAATGAAATCTGCCAGTGTGCTGAGAGCTTGAATGGTGTGAAGGAAGGCAGGTGGAAGTCCGTCCTCACGTTCTACAAACCTATTACTCGCGACCAGTCAATGGCAGCAGAGTTCCCTCGTGATTTTCTTGGCCTTTCAATACCAGAGCAGCCGAACAAATACTACTTCATAATCCGTGGACAAAGGATTGTTCTTGAGGCGCATGCTACGATACAGACAATCATGGAGAAGCTGCAATCATACAAGTCCAGGGTGTCCCTTAATTTTGAGGGTACTCAGTACCAACTTGGTGACTTTCAAGTAAGAGTGGGAAAGGTTGCTCCTAGTCACTCTGAAACTATGAGGGGAATAGTAATGGAGGTTGAGTATCTTCCGATTTCTTCAATTGATAAATCCAGGCAAATCCTAGAAGACTTTGTCGATATTTGGAAAGATACTCTTTCAAAGAGGTCGTTACCTGGCCAATTTCTGCACATTGAACCAAAATTTTCAGATTATGGTTTATCAGACCTCTATACGTCTCAACATACAGGGGTTCAGTATGCTACTGTGATGGCTCAATTGATTGCAACTGTACAATCAACACAAGTCAGAACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238862.p1 GENE.S_Transcript_238862~~S_Transcript_238862.p1 ORF type:complete len:227 (+),score=32.81,Med20|PF08612.7|1.2e-39 S_Transcript_238862:657-1337(+)
MFIFLPVSCRILHWHPNAGATVNTQIMNEICQCAESLNGVKEGRWKSVLTFYKPITRDQSMAAEFPRDFLGLSIPEQPNKYYFIIRGQRIVLEAHATIQTIMEKLQSYKSRVSLNFEGTQYQLGDFQVRVGKVAPSHSETMRGIVMEVEYLPISSIDKSRQILEDFVDIWKDTLSKRSLPGQFLHIEPKFSDYGLSDLYTSQHTGVQYATVMAQLIATVQSTQVRT*

Click here to download the sequence:
Link to NCBI Protein BLAST