Transcript Information: S_Transcript_238869.p1


Annotated TAIR IDAT2G28230.1
Annotated Gene NameTATA-binding related factor (TRF) of subunit 20 of Mediator complex
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:12037855-12039009 | Reverse length=219
E-Value3E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2362768992685
Replicate 212.199424814155
Replicate 312.042021795763
Condition 2: 8 Hour
Replicate 112.544347245372
Replicate 213.159910964545
Replicate 310.030987108226
Condition 3: 24 Hour
Replicate 111.950436262501
Replicate 213.731603484493
Replicate 39.6437228607797


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_238869.p1 GENE.S_Transcript_238869~~S_Transcript_238869.p1 ORF type:complete len:170 (+),score=24.93,Med20|PF08612.7|2.7e-33 S_Transcript_238869:262-771(+)
ATGCCTGTCAAGTGGATTCTGCACTGGCATCCTAATGCTGGTGCTACAGTGAATACTCAGATAATGAATGAAATCTGCCAGTGTGCTGAGAGCTTGAATGGTGTGAAGGAAGGCAGGTGGAAGTCCGTCCTCACGTTCTACAAACCTATTACTCGCGACCAGTCAATGGCAGCAGAGTTCCCTCGTGATTTTCTTGGCCTTTCAATACCAGAGCAGCCGAACAAATACTACTTCATAATTCGTGGACAAAGGATTGTTCTTGAAGCTGATGCTACGATACAGACAATCATGGAGAAGCTGCAATCATACAAGTCCAGGGTGTCCCTTAATTTTGAGGGTACTCAGTACCAACTTGGTGACTTTCAAGTAAGAGTGGGAAAGGTTGCTCCTAGTCACTCTGAAACTATGAGGGGAATAGTAATGGAGGTACAAGGCTCAAGTCATTATTGTCTAAGTATCTCAGCTTTTCTTATGCTAGACGTGTTGTTATTAGTATGCTCTGAACTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_238869.p1 GENE.S_Transcript_238869~~S_Transcript_238869.p1 ORF type:complete len:170 (+),score=24.93,Med20|PF08612.7|2.7e-33 S_Transcript_238869:262-771(+)
MPVKWILHWHPNAGATVNTQIMNEICQCAESLNGVKEGRWKSVLTFYKPITRDQSMAAEFPRDFLGLSIPEQPNKYYFIIRGQRIVLEADATIQTIMEKLQSYKSRVSLNFEGTQYQLGDFQVRVGKVAPSHSETMRGIVMEVQGSSHYCLSISAFLMLDVLLLVCSEL*

Click here to download the sequence:
Link to NCBI Protein BLAST