Transcript Information: S_Transcript_239017.p1


Annotated TAIR IDAT5G53440.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21683679-21687970 | Reverse length=1181
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0540485201683
Replicate 27.4428687663905
Replicate 39.5546705011425
Condition 2: 8 Hour
Replicate 19.2495668845396
Replicate 215.094259323189
Replicate 313.868141815289
Condition 3: 24 Hour
Replicate 19.7380805921926
Replicate 27.6456231823823
Replicate 39.4202816452843


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_239017.p1 GENE.S_Transcript_239017~~S_Transcript_239017.p1 ORF type:complete len:83 (+),score=15.06 S_Transcript_239017:3-251(+)
ATGAAACTTGATAAGGAGGGGAGTAAGGCTCGAGAGCCAAAAAGTGATATAGACTTGGATATTGAATGGGATAGGGAAAGAAGGGACAAATATCATGGTCGAAGTAGGGATAAGGACTCTGATAGAGATCAAAATGATACAGGGCCTCATATCAGAGATAAAAAGATTGAAAGGGATACTAAACTATGGGACGATGATACATGGATAAGGAAAACGACAAGAATAATGTCTGAGATAAATATAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_239017.p1 GENE.S_Transcript_239017~~S_Transcript_239017.p1 ORF type:complete len:83 (+),score=15.06 S_Transcript_239017:3-251(+)
MKLDKEGSKAREPKSDIDLDIEWDRERRDKYHGRSRDKDSDRDQNDTGPHIRDKKIERDTKLWDDDTWIRKTTRIMSEINIK*

Click here to download the sequence:
Link to NCBI Protein BLAST