Transcript Information: S_Transcript_239068.p1


Annotated TAIR IDAT1G45474.1
Annotated Gene Namephotosystem I light harvesting complex gene 5
Annotated Gene Symbol(s)LHCA5
Annotation TypeOrtholog
Chromosome Positionchr1:17179353-17180439 | Forward length=256
E-Value3.6E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.885747121887
Replicate 21.5949004499408
Replicate 31.5554114769302
Condition 2: 8 Hour
Replicate 14.1109186153509
Replicate 22.6954034505695
Replicate 32.5681744102387
Condition 3: 24 Hour
Replicate 11.0527654694262
Replicate 21.6383478247962
Replicate 31.8232803184421


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_239068.p1 GENE.S_Transcript_239068~~S_Transcript_239068.p1 ORF type:3prime_partial len:83 (+),score=10.64 S_Transcript_239068:218-463(+)
ATGGCATCAACTACTATAGTAGGGAAAGTTTCCCTTGTACCTGAGCTAACTTGTATCTGTACTCGTTCATCCTTCCTCACAAACACCAACTTTTATACTTCTTCTTGTTGTTGTTGTTTGTCTCGGGCTAACTCATTTGGTTCAACGCAATTAGTTGCGCTTCATGCTCAAGCTCGCTCTACTTGGCTTCCTGGTCTCGACCCTCCACCACACCTTGATGGAAGTTTGGCTGGGGATTTTGGATTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_239068.p1 GENE.S_Transcript_239068~~S_Transcript_239068.p1 ORF type:3prime_partial len:83 (+),score=10.64 S_Transcript_239068:218-463(+)
MASTTIVGKVSLVPELTCICTRSSFLTNTNFYTSSCCCCLSRANSFGSTQLVALHAQARSTWLPGLDPPPHLDGSLAGDFGF

Click here to download the sequence:
Link to NCBI Protein BLAST