Transcript Information: S_Transcript_239168.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.19555823490809
Condition 3: 24 Hour
Replicate 10.10020588757153
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_239168.p2 GENE.S_Transcript_239168~~S_Transcript_239168.p2 ORF type:complete len:218 (-),score=42.25,rve|PF00665.22|1.8e-22,gag_pre-integrs|PF13976.2|5.3e-16,gag_pre-integrs|PF13976.2|7.6e+02 S_Transcript_239168:2400-3053(-)
ATGAAAGCAAATCGTGCAGGGAGCCTATATATTTTGCAAGGCTCAGCTGTGACAGGTATAGCAGTTGTTTCATCATCATCAATCCTTGGTTCTGAGAACACTCAGTTATGGCACATGCGTCTGGGCCACATGAGTGAAAAGGGAATGACTGTTCTAAGCAAGAGAGGTCTCCTTGGTGATCTAGGCACTGGTAAGCTCGAGTTCTGTGAGCATTGTGTGTTTGGGAAACAAAAGAAGGTTAGTTTCTCTAAAGCCACTCATCACACTAAAGGTATCCTTTATTACAAACATTCTGATTTATGGGGGCCATCTAAAGTTGCCTCTATTAGTGGTAAACATTATATGATGACTATTGTTGATGATTATTCTCGTGAAGTCTGGGTTTATTTTTTGAGGCATAAAAATGAAGCATTTCCTACTTTTAAGAAGTGGAAAACTCTTGTTGAAAACCAGATTGAGAGAAAAGTCAAAAAGCTTAGAACTGATAATGGATTGGAGTTTTGTGAAAGTGACTTCAATGAATTTTGTGCAATCAATGGCATTGCCAGGCATAAAAGCCTTCCAAGAAGGCCCCAACAAAATGGTGTTGGGGAACGGATTAATAGAACTATTTTGGAGAGAGCTCATTGTATGCTTTCAAATGTTGGGTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_239168.p2 GENE.S_Transcript_239168~~S_Transcript_239168.p2 ORF type:complete len:218 (-),score=42.25,rve|PF00665.22|1.8e-22,gag_pre-integrs|PF13976.2|5.3e-16,gag_pre-integrs|PF13976.2|7.6e+02 S_Transcript_239168:2400-3053(-)
MKANRAGSLYILQGSAVTGIAVVSSSSILGSENTQLWHMRLGHMSEKGMTVLSKRGLLGDLGTGKLEFCEHCVFGKQKKVSFSKATHHTKGILYYKHSDLWGPSKVASISGKHYMMTIVDDYSREVWVYFLRHKNEAFPTFKKWKTLVENQIERKVKKLRTDNGLEFCESDFNEFCAINGIARHKSLPRRPQQNGVGERINRTILERAHCMLSNVGL*

Click here to download the sequence:
Link to NCBI Protein BLAST