Transcript Information: S_Transcript_23944.p1


Annotated TAIR IDAT5G52510.1
Annotated Gene NameSCARECROW-like 8
Annotated Gene Symbol(s)SCL8
Annotation TypeOrtholog
Chromosome Positionchr5:21307196-21309118 | Forward length=640
E-Value2.1E-131
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.607303430325
Replicate 230.944295896962
Replicate 334.76426290519
Condition 2: 8 Hour
Replicate 123.062762371724
Replicate 221.371190873094
Replicate 321.656356352665
Condition 3: 24 Hour
Replicate 124.357394051813
Replicate 224.075774278388
Replicate 322.72401444806


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_23944.p1 GENE.S_Transcript_23944~~S_Transcript_23944.p1 ORF type:complete len:626 (+),score=55.06,GRAS|PF03514.10|2.4e-100 S_Transcript_23944:984-2861(+)
ATGAGATCGGTAAAGCAGAGAACCAACAGTTTCTCTTCTTCTCCGATTTCACCTTTGTCTTCTTCCGTTGATCTTTGCTCCCCTAATAATAATAATAATTCTCTCTCTTCTGCCGCCCGGTTTGGTGTGCCGGTTTACCAGCAACTCCGGTCTCAACTTCAACAACAACAACAACCACCACCCGGGTTGCTTCTCAACAACCCTAACCAATTCCAGTCCACAAATAATAATTCATTATTCCAAGCAGCCGGCACCACCAATACCACCTTCACCAATAATAATTTATTAAACCCGGTCCACAATAACAATAGCCAGCCTTTCTCCACACTTGGGTACTCGAATATGGGGTCCAGCGTGATACAACCGAAGCCAGAGCCGGTCAAGATGCCGGAGATTGGATACTCAAACCCGGTCCAGCCAAAAACCGAACCGGAAGAGGATCACAAGATCTTAAACACCCTACAGAAGCTCGAGAAGCAGCTTTTAGACGACGATGAAAACCAGGAAGAAGGCGACGCCGTTTCAGTCATCACCAACAGCGAGTGGTCGGAGACTTTCCAGAATCTCATGGGCCTGGACGCAAGCCCAGCTCAAAGCCCAACCCCGAATGTTGTCCCAGGCTCTTCTAGCACAAGTGGAAGCAACAACAACAATGTCACGACCCCAAACAACAACATGATATCACCGTCGCCAACCTCGTCCACGTCATCATGCTGTTCAACCTCGGCATCTCCGATGGCGACCCCGTCAATTCCGGCTAAGCAGATGATCATTGAGGCGGCGACGGCGATATCGGACGGGAAAATTGAGACTTGTATGGAGGTGATTGGGAGGTTAGCCCAAGTGGCTAACCCCAAGGGTAATTCAGAACAAAGGCTGGCTTATTACATGTGCAACGCGCTTCGTTCACGCGCGTGTCCGAGTGAAAACCCGCCCCCTGTGATGGAGCTCTATGGGAAGGACCAAATGTCTGCTATGTACTGGCTCTATGAGCTCTCCCCTTGTTTTAAGTTCGGCCTCTTGACTGCCAATTTGGTTATGCTCGAGGCAATTACCTCTGCGCTTCAAGAGGGTTCGAGGATACACGTGGTTGATTTCGACGTCGGCCATGGCGCGCAGTACGCCAATCTCTTGCGCGCTCTGGCCGATCGTCGTGGGTCCGGAGCAGTCACAGAGTTGAAGGTGACTGTCGTCGAGACGGAGCTCGGGAATGGAGGGGCTTGTGTTGAGCAGGTCAAGGATGGGCTGGTGAAGCTTGCTGAGGGAGTCGGGATTGATTTGAAGTTGGAGGTCGCGAGTCGAAAAATCCACGAGCTGACCCGCGAGTCGCTCGGGTGCGAGGAGGGGGAGGCCGTGGTTGTGAATTTCGCTTTCAAGCTTTACCGGGTACCGGATGAGAGCGTATCGATGGAGAATCTTCGGGACGAGCTTCTCAGGCGCGTGAAGAGGCTTTCCCCACGCGCTGTTACGTTGGTGGAGCAGGATATGAATGCCAACACGGCCCCATTCATGACCCGGGTTAACGAGGCTTTGGAAAAGTATGGCGCTTTATTCGACTCGCTCGAGTCGACTCTCCCCAAGGATAACTCGGACCGGACACGGGCTGAGGAGGCCTTAGGGCGGAAGATGGCGAATTCGATCGCGTGTGAAGGGCGGGAGAGAGTGGAGCGGTCGGAGGTGTTCGGTAAATGGAGGGCTAGAATGGGGATGGCAGGGTTCGAGCTGAAGCCACTGAGTCAGACGGTGGCTGAGTCAATGCGGACCAAACTCAACTCGGCTAGAGGCGGAAACCCGGGTTTTATGGTTAAGGAAGTGAATGGTGGGGTTGGGTTTGGATGGATGGGAAAAACTCTCACAGTCGCGTCCGCTTGGCGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_23944.p1 GENE.S_Transcript_23944~~S_Transcript_23944.p1 ORF type:complete len:626 (+),score=55.06,GRAS|PF03514.10|2.4e-100 S_Transcript_23944:984-2861(+)
MRSVKQRTNSFSSSPISPLSSSVDLCSPNNNNNSLSSAARFGVPVYQQLRSQLQQQQQPPPGLLLNNPNQFQSTNNNSLFQAAGTTNTTFTNNNLLNPVHNNNSQPFSTLGYSNMGSSVIQPKPEPVKMPEIGYSNPVQPKTEPEEDHKILNTLQKLEKQLLDDDENQEEGDAVSVITNSEWSETFQNLMGLDASPAQSPTPNVVPGSSSTSGSNNNNVTTPNNNMISPSPTSSTSSCCSTSASPMATPSIPAKQMIIEAATAISDGKIETCMEVIGRLAQVANPKGNSEQRLAYYMCNALRSRACPSENPPPVMELYGKDQMSAMYWLYELSPCFKFGLLTANLVMLEAITSALQEGSRIHVVDFDVGHGAQYANLLRALADRRGSGAVTELKVTVVETELGNGGACVEQVKDGLVKLAEGVGIDLKLEVASRKIHELTRESLGCEEGEAVVVNFAFKLYRVPDESVSMENLRDELLRRVKRLSPRAVTLVEQDMNANTAPFMTRVNEALEKYGALFDSLESTLPKDNSDRTRAEEALGRKMANSIACEGRERVERSEVFGKWRARMGMAGFELKPLSQTVAESMRTKLNSARGGNPGFMVKEVNGGVGFGWMGKTLTVASAWR*

Click here to download the sequence:
Link to NCBI Protein BLAST