Transcript Information: S_Transcript_239496.p1


Annotated TAIR IDAT1G75850.1
Annotated Gene NameVPS35 Homolog B
Annotated Gene Symbol(s)VPS35B
Annotation TypeOrtholog
Chromosome Positionchr1:28478053-28483874 | Reverse length=790
E-Value3.7E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.58490112604792
Replicate 21.4546894213746
Replicate 31.0133371474506
Condition 2: 8 Hour
Replicate 11.1717247426996
Replicate 24.1793563392896
Replicate 34.216321504282
Condition 3: 24 Hour
Replicate 12.1604829825862
Replicate 22.2414758701882
Replicate 32.7716532313314


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_239496.p1 GENE.S_Transcript_239496~~S_Transcript_239496.p1 ORF type:internal len:91 (+),score=16.72,Vps35|PF03635.13|3.4e-23 S_Transcript_239496:3-272(+)
ACACAAAAGAAAATTTACCAGTTGTTAAATAAGCTTATTGAGGCTCTCTCAAATGTTCCGGCACCTGAGCTGGCCTTGCGTCTGTACTTGCAATGCGCCGAGGCTGCAAATGATTCTGACCTTGAACCTGTTGCCTGTGAATTTTTCACTCAAGCCTATATCTTATATGAGGAAGAGATATCGGACTCCAGAGAACAGGTGACTGCATTATACCTGATAATAGGGACTCTTCAAAGAATGCATGTCTTTGGGGTTGAGAACAGGGATACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_239496.p1 GENE.S_Transcript_239496~~S_Transcript_239496.p1 ORF type:internal len:91 (+),score=16.72,Vps35|PF03635.13|3.4e-23 S_Transcript_239496:3-272(+)
TQKKIYQLLNKLIEALSNVPAPELALRLYLQCAEAANDSDLEPVACEFFTQAYILYEEEISDSREQVTALYLIIGTLQRMHVFGVENRDT

Click here to download the sequence:
Link to NCBI Protein BLAST