Transcript Information: S_Transcript_239619.p1


Annotated TAIR IDAT5G63380.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25387581-25390026 | Reverse length=562
E-Value6E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1482191745933
Replicate 214.065028342916
Replicate 36.4549576292602
Condition 2: 8 Hour
Replicate 18.130305058407
Replicate 210.346979995874
Replicate 35.995082138901
Condition 3: 24 Hour
Replicate 110.1032586144
Replicate 213.739935768161
Replicate 38.0395266541308


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_239619.p1 GENE.S_Transcript_239619~~S_Transcript_239619.p1 ORF type:internal len:160 (-),score=-6.13,AMP-binding|PF00501.24|1.7e-25 S_Transcript_239619:1-477(-)
ACTCGCTCCGAGTTGACTCACCTCATCAACCTCTCCAAACCCTCCCTCGTCTTCACCACCACCTCCTTATCCCCTAAGCTCGCCTCCTTTAACCTCCCCACCATCCTCCTCGACTTGCCCGAGTTCGACTCGCTCCTGACTCGCCGAGTCGACTCCGATTCCGTCCCCCGAGTCGCCGTCTCCGACTCCGACGTCGCCGCGATTCTCTACTCTTCTGGTACCACCGGCCGAGTCAAGGGCGTCGAGTTGACTCACCGCAATTTCATTGCCCTAATTTCCGGATTCTCTTCCAGAATCGATGAAGGAGAGTCTCAAAAACCTCCAGTCTCTCTCTTCACTCTGCCTTTATTCCACGTCTTCGGATTCTTCATGCTCTTGAGAGTCGTTTCGTTGGCTGAGACCGTCGTTTTGATGGAACGATTCGATTTCGAGAAGATGTTAGCTGCGATTCAAAAGTACAAGGTTACGTACATGCCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_239619.p1 GENE.S_Transcript_239619~~S_Transcript_239619.p1 ORF type:internal len:160 (-),score=-6.13,AMP-binding|PF00501.24|1.7e-25 S_Transcript_239619:1-477(-)
TRSELTHLINLSKPSLVFTTTSLSPKLASFNLPTILLDLPEFDSLLTRRVDSDSVPRVAVSDSDVAAILYSSGTTGRVKGVELTHRNFIALISGFSSRIDEGESQKPPVSLFTLPLFHVFGFFMLLRVVSLAETVVLMERFDFEKMLAAIQKYKVTYMP

Click here to download the sequence:
Link to NCBI Protein BLAST