Transcript Information: S_Transcript_239621.p1


Annotated TAIR IDAT5G63380.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25387581-25390026 | Reverse length=562
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1088750514659
Replicate 20.45964144911489
Replicate 30.76844733681669
Condition 2: 8 Hour
Replicate 10.22213948247014
Replicate 20.23304008999715
Replicate 31.3322404753113
Condition 3: 24 Hour
Replicate 10.68265260908107
Replicate 21.4164882235217
Replicate 31.0509185168798


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_239621.p1 GENE.S_Transcript_239621~~S_Transcript_239621.p1 ORF type:internal len:96 (+),score=4.23,AMP-binding|PF00501.24|2.3e-09 S_Transcript_239621:2-286(+)
TTCAACCCTTCCACCCCCGTCATCATTGACTCCACCACTGACGTCACCCTCACTTACTCCGAGTTTCTCAGCCGAGTCAACTCACTCTCCGTCTCTCTCTCCCTCTCCCTCCCCTCCCCATCCTCCTCCGCCCGCCACGTGGCCCTCATTCTCTCTCCTCCCTCCCTTCACATTCCCGTCCTCTACTTCTCCCTCCTCTCCCTCAACGTCGTCGTTTCCCCCGCCAACCCGGTCTCGACTCGCTCCGAGTTGACTCACCTCATCAACCTCTCCAAACCCTCCCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_239621.p1 GENE.S_Transcript_239621~~S_Transcript_239621.p1 ORF type:internal len:96 (+),score=4.23,AMP-binding|PF00501.24|2.3e-09 S_Transcript_239621:2-286(+)
FNPSTPVIIDSTTDVTLTYSEFLSRVNSLSVSLSLSLPSPSSSARHVALILSPPSLHIPVLYFSLLSLNVVVSPANPVSTRSELTHLINLSKPSL

Click here to download the sequence:
Link to NCBI Protein BLAST