Transcript Information: S_Transcript_239940.p1


Annotated TAIR IDAT3G15810.1
Annotated Gene NameProtein of unknown function (DUF567)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5348054-5349178 | Reverse length=220
E-Value8E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.167377366259
Replicate 20.97131777926166
Replicate 30.92793640672204
Condition 2: 8 Hour
Replicate 11.0729756134407
Replicate 20.56281380225727
Replicate 30.67030967311262
Condition 3: 24 Hour
Replicate 11.3738920434336
Replicate 20.71269847724363
Replicate 32.0621797312359


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_239940.p1 GENE.S_Transcript_239940~~S_Transcript_239940.p1 ORF type:5prime_partial len:159 (-),score=-6.76,LOR|PF04525.8|5.5e-22 S_Transcript_239940:153-629(-)
TTAACGTACAAACACACAACACATTTCTTGCTTTTCCCTTCTTTTAAATCTCTTCAAATATTTCCCTTTCTTTTTTTTTTATTTTTAAAAACGGGTATAAGAATTAGAGGAGAGAAAGAAATCACAAGATCAAAAAGAAAGATGAAGTTAGGAGATTGTGGATTTATTTCTGAAAAAGAAACCCATCTAACGGTTTGTAAAACATCACTTTTCTTCACTGGTGATGGCTTCACTGCTTATGATTGTAATGGCCAACTCGTTTTCCGAGTTGACTCGTACGGTCCCGATTGGCGTGACAAGGATGAGGTTGTTCTCATGGACGCCCCTGGCCATTGTCTTCTCACAGTTCGCCGTAAGGTATGCATATATCACATAACTCGGAACTCGCTCTTATGTACGAATCGACTCACTGGGTCATGTTCTTGTTTATCTACTTTATTTTGTCGGTTTTACGATATGGGCTGTGGGAAAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_239940.p1 GENE.S_Transcript_239940~~S_Transcript_239940.p1 ORF type:5prime_partial len:159 (-),score=-6.76,LOR|PF04525.8|5.5e-22 S_Transcript_239940:153-629(-)
LTYKHTTHFLLFPSFKSLQIFPFLFFLFLKTGIRIRGEKEITRSKRKMKLGDCGFISEKETHLTVCKTSLFFTGDGFTAYDCNGQLVFRVDSYGPDWRDKDEVVLMDAPGHCLLTVRRKVCIYHITRNSLLCTNRLTGSCSCLSTLFCRFYDMGCGKI*

Click here to download the sequence:
Link to NCBI Protein BLAST