Transcript Information: S_Transcript_240162.p1


Annotated TAIR IDAT5G48450.1
Annotated Gene NameSKU5 similar 3
Annotated Gene Symbol(s)sks3
Annotation TypeOrtholog
Chromosome Positionchr5:19632791-19635612 | Reverse length=621
E-Value4.6E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5955541058585
Replicate 24.2994154009516
Replicate 33.5939690829581
Condition 2: 8 Hour
Replicate 15.9054927032061
Replicate 25.1627343014754
Replicate 34.7004176769959
Condition 3: 24 Hour
Replicate 10.89620034833207
Replicate 21.627145446507
Replicate 31.8108134444699


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_240162.p1 GENE.S_Transcript_240162~~S_Transcript_240162.p1 ORF type:5prime_partial len:195 (-),score=22.25,Cu-oxidase_2|PF07731.10|3.8e-27 S_Transcript_240162:277-861(-)
TTATACCTCGCACAGAAGCTTAAGGTACCGGGGGTGTACAAGCTTGATTTTCCGAACAGGCCAATGAATAGACCTCCAAGGATTGACACATCAGTCATAAATGCAACTTATAAAGGCTTTGTAGAGATCATACTTCAAAACAATGATACAACTGTTCATACTTATCATCTAGATGGATATGCATTCTTCGTTGTGGGTATGGGTAATGGAGTATGGACAGAGAACAGCAGGTCCACTTACAACAAAGGGGATGCGGTCGCTCATTGTACCACTCAGATCTTTCCTGGATCATGGACTGCTGTTATGGTGTATCTTGACAACTCTGGTATTTGGAATCTCCGCGCAGAGAAATTGAACTCTTGGTATTTGGGACAGGAAGTTTATTTGAGTGTTGTGAATCCAGACAAGGACAAGACAGAAGTCCCTTTGCCAGATAACACCATCTATTGTGGTGCACTCGCATCTTTACAGAGGGACCAAGCTCGGAGAATCTATTTTTCAAGTGCACAGCAACTCTCTCATGCAAGGAAAGCTATTCTGTTTTCATTAGCCATTACGTTATTTGGGTTCTCGTTCAGGTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_240162.p1 GENE.S_Transcript_240162~~S_Transcript_240162.p1 ORF type:5prime_partial len:195 (-),score=22.25,Cu-oxidase_2|PF07731.10|3.8e-27 S_Transcript_240162:277-861(-)
LYLAQKLKVPGVYKLDFPNRPMNRPPRIDTSVINATYKGFVEIILQNNDTTVHTYHLDGYAFFVVGMGNGVWTENSRSTYNKGDAVAHCTTQIFPGSWTAVMVYLDNSGIWNLRAEKLNSWYLGQEVYLSVVNPDKDKTEVPLPDNTIYCGALASLQRDQARRIYFSSAQQLSHARKAILFSLAITLFGFSFRY*

Click here to download the sequence:
Link to NCBI Protein BLAST