Transcript Information: S_Transcript_240615.p2


Annotated TAIR IDAT5G09950.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3102877-3105864 | Reverse length=995
E-Value3E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33475473251799
Replicate 20.32377259308722
Replicate 30.15465606778701
Condition 2: 8 Hour
Replicate 10.93885366176057
Replicate 20.7504184030097
Replicate 30.98312085389851
Condition 3: 24 Hour
Replicate 10.22898200723893
Replicate 20.14253969544873
Replicate 30.42301122692019


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_240615.p2 GENE.S_Transcript_240615~~S_Transcript_240615.p2 ORF type:complete len:477 (+),score=64.84,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|1.8e-07,PPR_2|PF13041.2|14,PPR_2|PF13041.2|4e-09,PPR_2|PF13041.2|6.8,PPR_2|PF13041.2|1e-05,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|1.2e-05,PPR|PF01535.16|4.1e+03,PPR|PF01535.16|0.00077,PPR|PF01535.16|0.00017,PPR|PF01535.16|9.8e+02,PPR|PF01535.16|2.7e-06,PPR|PF01535.16|0.069,PPR|PF01535.16|0.0017,PPR|PF01535.16|3.2e+02,PPR|PF01535.16|0.082,PPR|PF01535.16|0.0092,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|6.1e-05,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|5.7,PPR_1|PF12854.3|1.5,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.92,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|0.0081,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|0.77,PPR_3|PF13812.2|3.7e+02 S_Transcript_240615:67-1497(+)
ATGTCTTCTCGCTTTCTTCAATCCAGGTTCATCTTCCAACGCTTGTCTCCCTTTACTACACTTCCAACTGTCTCTTATCTTCCCTCTGTAAAACCCATCAATAACTATAACCCTTCTCAACTACCCCCTTGTTTTTTCACACCTGATAGCGATATTCGAGATTTTCTTGTATCTCGGTACCAACATTCTAGCTGCCCAGATGATGCTTATCAGCTTCATTTGGGGATCATCAAACATGGGTTTGTCTCAGATTTGTTTCTTGTTAATACCCTTATCAATTTGTATGCTAGAATTGGTGATATGTTGTTGGCACACAAGGTGTTCGATGAAATCCCTGAGAGAAATCTTGTCACTTGGGCGTGTTTGATTTCAGGTTGTGTACAAAATGGCATGATCAACAAGGCATGTTTTCTATTCAAGGGCCTGGTTTCTGCTGGCTTTGTACCCAATCACTATGCATTCGGAAGCGTCCTTCGTGCTTGCCAAGAGTTGGGACCAGATAGTCTTAAATTTGGTATGCAAATTCATGGCTTGGTATCAAAGACTGTGTTTTCAGATGATGTGCTTGTAAGTAATGTATTGATATCAATGTATCGAAGCTGTTGCTTGGAGTCTTTGAGCTCTGCTAGGAGAGTGTTTGATGAGATACATGATAGGAATTCAGTATCATGGAACTCTATTATCTCAGCGTATTGCCAAAGAGGCGATCCTGTTTCCGCTTGTATGCTGTTCTCGGGGATGCAAAATGAAGCGATGAGTTTCGACATGAAGCCTAATGAATATACATTGTGTAGCATAATTAGTGCTGCAGCTACATCTCCAGATTCGGGTTTGTGTTTGCTTGAGCAGATGCTTGCGTGGGTGCAGAAATCTGGATTTATAGGAGATTTGTATGTAGGAAGTGCTTTGGATAGTGGGTTTGCGAAGTTTGGATTGATTGATGCTGCAAGGAAGATTTTCGAGCAGATGGGCACTCAGAATGCTGTCACCTTGAATGGACTGATGGTGGGATTAGTGCAGCGAAAGAGAGGAGAAAAAGCAGTGGACGTATTTAAAGAAATGAGACATTTGGTTGAAATCAATCCCGACTCTTATGTGGTCCTATTAAACGCTTTTGCCGAATTTGACTTGCTAGAAGAAGGTAGGGGAAAAGGTAAAGAACTTCATGCATATGCAATCCAAAATGGCTTGGACAAGGCTAAGGTTGCAGTTGGTAGTGGCCTGATTAATATGTATGCAAAATGTGGTGCTATAGCTAGTGCGTGTTCAGTTTTTGAATTAATGGTAGACAAAGATTTAGTTTCATGGAACTCTTTGATATCTAGTCTTGACCAGACTGAACTATATGAAGAAGCTGTCACTACCTTTTGCCGCATGAGGAGTAGTGAACTGAAGCCGTCCAATTTCACATTGATAAGCTGCTTGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_240615.p2 GENE.S_Transcript_240615~~S_Transcript_240615.p2 ORF type:complete len:477 (+),score=64.84,PPR_2|PF13041.2|0.011,PPR_2|PF13041.2|1.8e-07,PPR_2|PF13041.2|14,PPR_2|PF13041.2|4e-09,PPR_2|PF13041.2|6.8,PPR_2|PF13041.2|1e-05,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|1.2e-05,PPR|PF01535.16|4.1e+03,PPR|PF01535.16|0.00077,PPR|PF01535.16|0.00017,PPR|PF01535.16|9.8e+02,PPR|PF01535.16|2.7e-06,PPR|PF01535.16|0.069,PPR|PF01535.16|0.0017,PPR|PF01535.16|3.2e+02,PPR|PF01535.16|0.082,PPR|PF01535.16|0.0092,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|6.1e-05,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|5.7,PPR_1|PF12854.3|1.5,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|0.92,PPR_3|PF13812.2|7.4e+03,PPR_3|PF13812.2|0.0081,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|9.2e+02,PPR_3|PF13812.2|0.77,PPR_3|PF13812.2|3.7e+02 S_Transcript_240615:67-1497(+)
MSSRFLQSRFIFQRLSPFTTLPTVSYLPSVKPINNYNPSQLPPCFFTPDSDIRDFLVSRYQHSSCPDDAYQLHLGIIKHGFVSDLFLVNTLINLYARIGDMLLAHKVFDEIPERNLVTWACLISGCVQNGMINKACFLFKGLVSAGFVPNHYAFGSVLRACQELGPDSLKFGMQIHGLVSKTVFSDDVLVSNVLISMYRSCCLESLSSARRVFDEIHDRNSVSWNSIISAYCQRGDPVSACMLFSGMQNEAMSFDMKPNEYTLCSIISAAATSPDSGLCLLEQMLAWVQKSGFIGDLYVGSALDSGFAKFGLIDAARKIFEQMGTQNAVTLNGLMVGLVQRKRGEKAVDVFKEMRHLVEINPDSYVVLLNAFAEFDLLEEGRGKGKELHAYAIQNGLDKAKVAVGSGLINMYAKCGAIASACSVFELMVDKDLVSWNSLISSLDQTELYEEAVTTFCRMRSSELKPSNFTLISCLS*

Click here to download the sequence:
Link to NCBI Protein BLAST