Transcript Information: S_Transcript_240909.p1


Annotated TAIR IDAT5G40140.1
Annotated Gene NameRING/U-box superfamily protein with ARM repeat domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16057347-16058999 | Forward length=550
E-Value7.9E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8655248623986
Replicate 25.9075228869848
Replicate 34.803845646548
Condition 2: 8 Hour
Replicate 16.2150500013502
Replicate 27.2535319815507
Replicate 35.5910419947492
Condition 3: 24 Hour
Replicate 15.8889667697777
Replicate 26.0684522800056
Replicate 35.3751897912543


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_240909.p1 GENE.S_Transcript_240909~~S_Transcript_240909.p1 ORF type:complete len:549 (+),score=48.32,Arm|PF00514.19|0.55,Arm|PF00514.19|0.089,Arm|PF00514.19|0.37,Arm|PF00514.19|7.3e+02,Arm|PF00514.19|0.22,Arm|PF00514.19|1.9e+03,U-box|PF04564.11|5.9e-10 S_Transcript_240909:197-1843(+)
ATGAGGTTCAAACAACAACAACAACAACAAGAATATCATCAAAAAGCAAAGATGGGCACTCACCGCTGGAAGATCTCAATCTACAGATCCAACTCCATACCCACAACCAAACCCCAACCCGAACCCGACCCACCATCCGAATTCCTCTGCCCAATCTCCGCCTCACTCATGGCCGACCCGGTGATCGTCTCCACAGGCCAGACCTTCGAGCGGGCTTGCGTCACCGCCTGCAAGACACTCGGGTACACCCCGACCCTCAAAGACGGGTCCGTACCCGACTTGTCCGTCATTATCCCCAACTTGGCCCTGAAATCCTCCATCCTCAATTGGGCCTGGGCCCACTCCTCCCCCCCGCCTCGGCCCGTCGAGCTGGCCCAAGCCCTGAAGCTCGTACGAGGCTTGATGTCCAACTCAAGGGAGAAAATATCGGGTGAGCTCACAAAGGAGATGATAAATAGTAGTCCGAATATATTGGATCATGCGGAGAGCGAGTTGACTCGGAGACAGGGGCGGTTCGACTCGAGCGAGTCGTCGTTCGGGAATGCACCGCCGTTGGCGCTGACGACTCGGCCGAGCTGCTACTCGTCTTGCTCGTCGAGTTCCGAGTTCGAGGTGGTGGCGGGTGGCGGTGGTGGCACGTGCGAGGATGAAGGGTTCTTGGCGAAGTTAAGTAGCCCGCACGTGTATGAGCAGGAAGAAGGAGTGGCTGAGCTGAGGAAAGTTACAAGGAGTTGTGAAGGGTCTCGTTTGAGTTTGTCTACTCCTCGTCTTTTGTGTGCTTTGAGACTCTTAATTACGTCTAAATACTCTGACATTCAGGTGGATGCATTAGCAGCCTTGGTGAACCTATCGTTAGAAAAAACCAACAAGGTGAAGATAGTCCGGGCAGGATTTGCGCCTCTCTTAATTGACATCTTAAGGGGGCCCAGATTCCCTGAAGCGCAGGAACACGCTTGTGGTGCACTCTTCAGCTTAGCCCTTGATGACGACAACAAAACCGCCATCGGTGTGCTCGGCGCACTACCGCCGTTGATCCACATCATGATGGCATCATCATCAAACACTATCACTTGCAGCACCACCGAGCGGGCCCGCCACGACGCGGCCTTAGCCTTGTACCACCTCTCACTGGTCCAAAGCAACCGGTCAAAGCTAGTCAAACTTGGGTCAGTCCAGCTTCTTCTAGGGATGGTCAAGTCGGGCCAGATGCCGGGCCGGGCTTTACTTATATTGTGTAACTTGGGGACTTGTAATGAGGGGAGGGCTGCTATGCTGGATGCGGGTGCAGTGGAGTTCTTTGTGGACTTGCTAAGGAAGAAAGGGGACCATGATCAGCAGTTTGACTTTGATGAGTCAACTAAGGAGAGTTGTGTGGCGGCGATCTTTGCGCTGAGTCACGGTGGTTTGAGGTTCCGAGGGCTAGCGAAGGCGGCTGGTGCGGTGGAGGTGCTCCGAGATATGGTGGAGCAAACGGGTCGTGAACGGGCTAGAGATAAGGCAAGGAGGGTTTTGGAGATGTTGAAAGCGAAGGAGGAAGAAGAGGAGGAGGATGTGGACTGGGAAAAGGTTCTTGAGTTTGGGTTTCCTACGAGTCGGTCTGTAATTCGACCCGGAAGTCAATCGTGTATGAATTCTAGTGAGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_240909.p1 GENE.S_Transcript_240909~~S_Transcript_240909.p1 ORF type:complete len:549 (+),score=48.32,Arm|PF00514.19|0.55,Arm|PF00514.19|0.089,Arm|PF00514.19|0.37,Arm|PF00514.19|7.3e+02,Arm|PF00514.19|0.22,Arm|PF00514.19|1.9e+03,U-box|PF04564.11|5.9e-10 S_Transcript_240909:197-1843(+)
MRFKQQQQQQEYHQKAKMGTHRWKISIYRSNSIPTTKPQPEPDPPSEFLCPISASLMADPVIVSTGQTFERACVTACKTLGYTPTLKDGSVPDLSVIIPNLALKSSILNWAWAHSSPPPRPVELAQALKLVRGLMSNSREKISGELTKEMINSSPNILDHAESELTRRQGRFDSSESSFGNAPPLALTTRPSCYSSCSSSSEFEVVAGGGGGTCEDEGFLAKLSSPHVYEQEEGVAELRKVTRSCEGSRLSLSTPRLLCALRLLITSKYSDIQVDALAALVNLSLEKTNKVKIVRAGFAPLLIDILRGPRFPEAQEHACGALFSLALDDDNKTAIGVLGALPPLIHIMMASSSNTITCSTTERARHDAALALYHLSLVQSNRSKLVKLGSVQLLLGMVKSGQMPGRALLILCNLGTCNEGRAAMLDAGAVEFFVDLLRKKGDHDQQFDFDESTKESCVAAIFALSHGGLRFRGLAKAAGAVEVLRDMVEQTGRERARDKARRVLEMLKAKEEEEEEDVDWEKVLEFGFPTSRSVIRPGSQSCMNSSEF*

Click here to download the sequence:
Link to NCBI Protein BLAST