Transcript Information: S_Transcript_240910.p1


Annotated TAIR IDAT5G40140.1
Annotated Gene NameRING/U-box superfamily protein with ARM repeat domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16057347-16058999 | Forward length=550
E-Value9E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8253528708582
Replicate 22.6445124469624
Replicate 31.7053214871822
Condition 2: 8 Hour
Replicate 13.0673506620534
Replicate 22.1452457599738
Replicate 33.5039749487641
Condition 3: 24 Hour
Replicate 12.0199036104316
Replicate 22.2508579990208
Replicate 32.2457984744281


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_240910.p1 GENE.S_Transcript_240910~~S_Transcript_240910.p1 ORF type:complete len:292 (+),score=7.97,U-box|PF04564.11|2.2e-10 S_Transcript_240910:197-1072(+)
ATGAGGTTCAAACAACAACAACAACAACAAGAATATCATCAAAAAGCAAAGATGGGCACTCACCGCTGGAAGATCTCAATCTACAGATCCAACTCCATACCCACAACCAAACCCCAACCCGAACCCGACCCACCATCCGAATTCCTCTGCCCAATCTCCGCCTCACTCATGGCCGACCCGGTGATCGTCTCCACAGGCCAGACCTTCGAGCGGGCTTGCGTCACCGCCTGCAAGACACTCGGGTACACCCCGACCCTCAAAGACGGGTCCGTACCCGACTTGTCCGTCATTATCCCCAACTTGGCCCTGAAATCCTCCATCCTCAATTGGGCCTGGGCCCACTCCTCCCCCCCGCCTCGGCCCGTCGAGCTGGCCCAAGCCCTGAAGCTCGTACGAGGCTTGATGTCCAACTCAAGGGAGAAAATATCGGGTGAGCTCACAAAGGAGATGATGAATAGTAGTCCGAATATATTGGAGCACGCGGAGAGCGAGTTGACTCGGAGACAGGGGCGGTTAGACTCGGGCGAGTCGTCGTTCGGGAATGCGCCGCCGTTGGCGCTGACGACTCGGCCGAGCTGCTACTCGTCTTGCTCGTCGAGTTCCGAGTTCGAGGTGGTGGCGGGTGGCGGTGGTGGCACGTGCGAGGATGAAGGGTTCTTGGCGAAGTTAAGTAGCCCGCACGTGTATGAGCAGGAAGAAGGAGTGGCTGAGCTGAGGAAAGTTACAAGGAGTTGTGAAGGGTCTCGTTTGAGTTTGTCTACTCCTCGTCTTTTGTGTGCTTTGAGACTCTTAATTACGTCTAAATACTCTGACATTCAGGTTTGTTTTACTTTCTTCAAACTTATAGATATACAAGAATTTGTCATTAATCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_240910.p1 GENE.S_Transcript_240910~~S_Transcript_240910.p1 ORF type:complete len:292 (+),score=7.97,U-box|PF04564.11|2.2e-10 S_Transcript_240910:197-1072(+)
MRFKQQQQQQEYHQKAKMGTHRWKISIYRSNSIPTTKPQPEPDPPSEFLCPISASLMADPVIVSTGQTFERACVTACKTLGYTPTLKDGSVPDLSVIIPNLALKSSILNWAWAHSSPPPRPVELAQALKLVRGLMSNSREKISGELTKEMMNSSPNILEHAESELTRRQGRLDSGESSFGNAPPLALTTRPSCYSSCSSSSEFEVVAGGGGGTCEDEGFLAKLSSPHVYEQEEGVAELRKVTRSCEGSRLSLSTPRLLCALRLLITSKYSDIQVCFTFFKLIDIQEFVINQ*

Click here to download the sequence:
Link to NCBI Protein BLAST