Transcript Information: S_Transcript_241204.p1


Annotated TAIR IDAT3G23330.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8347200-8349347 | Forward length=715
E-Value3E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34879424947812
Replicate 20.26024260290647
Replicate 30.29005613761888
Condition 2: 8 Hour
Replicate 10.92233011856539
Replicate 20.73302256355592
Replicate 30.86604361173581
Condition 3: 24 Hour
Replicate 10.40082355028613
Replicate 20.29703553835318
Replicate 30.49584622028406


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_241204.p1 GENE.S_Transcript_241204~~S_Transcript_241204.p1 ORF type:complete len:763 (+),score=115.55,PPR|PF01535.16|0.19,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|1,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.16,PPR|PF01535.16|3e-07,PPR|PF01535.16|0.081,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|0.032,PPR|PF01535.16|7.4,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|1.4e+04,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|2.6e-07,PPR_2|PF13041.2|0.98,PPR_2|PF13041.2|0.0081,PPR_2|PF13041.2|7.3e-07,PPR_2|PF13041.2|3,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|24,PPR_2|PF13041.2|3.6e-10,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|8.3e+02,PPR_3|PF13812.2|18,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|27,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|0.82,PPR_3|PF13812.2|4.5,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|87,PPR_3|PF13812.2|25,DYW_deaminase|PF14432.2|5.2e-39,PPR_1|PF12854.3|9.4e+02,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|5.6e+03,PPR_1|PF12854.3|14,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|0.00082,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|8.4e-05,PPR_1|PF12854.3|0.061,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|51,PPR_1|PF12854.3|2.9e+03 S_Transcript_241204:256-2544(+)
ATGCTATGGACTTACCCATATACCAAGTTCTTCTATAACTCCATTGTTTTGAAAACCATTTGCAATCCTATTTTAACCTTAAATACTGCTAAACTGACAAATTCAGCCCAGATTGAGATTACCCAGAAAAAAATACAGCTATTCCATTCTTCTTTCTCCCCACAATTCCAATTTCTGGGTTTTATTGATAATTTGAAGGATGAGGAGACCCTTCAGATGCTTCATGGAAGTGTTATTAAAAAAGGTTCCATCTTTGATTTGGGTGTAGGGAATTATATGCTGAGCTTGTATGTGAAATTCAAGGATTTGGGTTCTTCCCAGAAGCTGTTTGATGAAATGTCTGAGAGAGATGTTCGCACATGGACTATTCTGGTTTCGGGTTTCACTCGAATGCGGTTGTTTCAGCTAGCACTAGATTGTTTCAAACTTATGCTTAGGGAGGGGGTTTGTCCGAATGGGTATACGTTGTCGAGTGTCTTCAAGTGTTGTTCGTTTGCTGGTTTGGTTCGAAATGGTAAGGCGGTTCATGGATGGATGATGACAAGGGGGGTTGGTTTGGATTCTGTCTTGAGGAACTCTATCCTGGACTTTTATGTGAAATGTGGTGAGCTTGATAATGCTAAGAGGTTGTTTCAGTTTACCGATGATGTGGATATGGTTTCGTGGAATATAATGATTGGTGCTTTTATGCAAAGGGGTGATGTGGAGAGTTCTCTTGATTTGTTTAGAAGATTGCCTGTTAAAGATGTTGCTACTTGGAATACAGTAATATCAGGTCTTATGAGAAATGGATCTGGAAGAACTGCGTTGGAGCTGCTCTACAACATGGTAAAAGGTCAAGCTTGTCTTAATGAATTCACCTTTACTATAGCGCTGGTTTTGGTTTCATCGCTGTCGATACTGGATCTAGGGGTACAGATACATGGTCGATTGATCAGACTCGGATTATATGATAATGTATATATACAATCTTCACTTATTGATATGTATTCCAAATGTGGGGTGGTTGCTAAGGCTTTAGAAGTCTTCAAGCAAGAACAAAGTTCCAAGTTGATGCATGACACTGTTTCTTGGAGTTCCCTGGTTTCTGGATTTTCTCAGAATGGTAGGTGGGAAGAAGCTATAGAAATGCTCTGCATAATGGTTCATGAAGGAATTAAAGTAGACAAATACATCCTAACTACTATTGTTTCTGTGTGTGCTGATTATGGGATGCTGGTTTTCGGTCAGCAGATCCATGCTCTTATACATAAAAGTGGACACAAAATGGATCTAGTTTTGTGTTCCTCCTTGGTCGATATGTATTCCAAATGTGGCAATTTAGGTGATGCTCAATCAATGTTTGACCAAAGTACTACAAGGAACACTATTCTATGGACAGCGTTAATAACTGGATATGCTTTACATGGCCATGGTAGAGAAGCTGTCAGACTTTTTGAGTTAATGATGAAGGAGGGTATTCAGCCAAATGAGGTGACCTTTGTAGCTGTTTTATTGGCATGCAGCCATGCTGGGCTAGTTCATGAAGGCCGCAAATATTTCAAAGACATGAAGGAAGTTTACAATGTTAAGCCCGGGCTTGAGCATTTCACTTGTATGGTTGATCTCCTTGGCCGGGCTGGCCAGTTGGATGAGATAAAGAACTTCATATACACCAATGAGATATCTCATCTTAGTTCAGTATGGAAGGCCTTCTTATCATCTTGTCGAGTTCACAAAAACTATGATATGGGAAAGTGGGTATCCCAAAAGTTGCTTGAACTTGAGCCATTGGAAGCAGAACCGTATGTTTTGCTGTCAAACATGTGCGCCACCTCTAACAGATGGGAAGAATCTGCCACAGTTAGGAGTTTGATGCAGAAGAAAGGGGTTAGAAAACACCCTGGTCAATCTTGGATTCAGCTCAACAATCAAGTTCATACTTTCATGATGGGCGATAGGTCTCACTCACAAGAAGCTGAAATCTATACTTATTTGGATAACCTAATTGGTAGGTTGAAAGAGATAGGTTATAGTACTGAAGTAGGGCAGGTTATGCAAGATGTAGAAGAAGAACAGCAGGAAATGTTTCTTCGTTACCATAGTGAGAAGCTTGCTGTTGCTTATGGCATTATTAGGACACCTAGTGGAGCACCAATTCGGGTCATGAAGAACCTCCGAGTCTGTCAGGATTGCCATAATTTTCTCAAGTATACTTCTCAGCTTTTAGGCAGGGATATAATCGTTAGAGACATCCGTAGATTCCACTTTTTCAAGGATGGGCTCTGTTCTTGTGGAGATTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_241204.p1 GENE.S_Transcript_241204~~S_Transcript_241204.p1 ORF type:complete len:763 (+),score=115.55,PPR|PF01535.16|0.19,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|1,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.16,PPR|PF01535.16|3e-07,PPR|PF01535.16|0.081,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|0.032,PPR|PF01535.16|7.4,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|1.4e+04,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|2.6e-07,PPR_2|PF13041.2|0.98,PPR_2|PF13041.2|0.0081,PPR_2|PF13041.2|7.3e-07,PPR_2|PF13041.2|3,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|24,PPR_2|PF13041.2|3.6e-10,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|8.3e+02,PPR_3|PF13812.2|18,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|27,PPR_3|PF13812.2|0.088,PPR_3|PF13812.2|0.82,PPR_3|PF13812.2|4.5,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|87,PPR_3|PF13812.2|25,DYW_deaminase|PF14432.2|5.2e-39,PPR_1|PF12854.3|9.4e+02,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|5.6e+03,PPR_1|PF12854.3|14,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|0.00082,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|8.4e-05,PPR_1|PF12854.3|0.061,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|51,PPR_1|PF12854.3|2.9e+03 S_Transcript_241204:256-2544(+)
MLWTYPYTKFFYNSIVLKTICNPILTLNTAKLTNSAQIEITQKKIQLFHSSFSPQFQFLGFIDNLKDEETLQMLHGSVIKKGSIFDLGVGNYMLSLYVKFKDLGSSQKLFDEMSERDVRTWTILVSGFTRMRLFQLALDCFKLMLREGVCPNGYTLSSVFKCCSFAGLVRNGKAVHGWMMTRGVGLDSVLRNSILDFYVKCGELDNAKRLFQFTDDVDMVSWNIMIGAFMQRGDVESSLDLFRRLPVKDVATWNTVISGLMRNGSGRTALELLYNMVKGQACLNEFTFTIALVLVSSLSILDLGVQIHGRLIRLGLYDNVYIQSSLIDMYSKCGVVAKALEVFKQEQSSKLMHDTVSWSSLVSGFSQNGRWEEAIEMLCIMVHEGIKVDKYILTTIVSVCADYGMLVFGQQIHALIHKSGHKMDLVLCSSLVDMYSKCGNLGDAQSMFDQSTTRNTILWTALITGYALHGHGREAVRLFELMMKEGIQPNEVTFVAVLLACSHAGLVHEGRKYFKDMKEVYNVKPGLEHFTCMVDLLGRAGQLDEIKNFIYTNEISHLSSVWKAFLSSCRVHKNYDMGKWVSQKLLELEPLEAEPYVLLSNMCATSNRWEESATVRSLMQKKGVRKHPGQSWIQLNNQVHTFMMGDRSHSQEAEIYTYLDNLIGRLKEIGYSTEVGQVMQDVEEEQQEMFLRYHSEKLAVAYGIIRTPSGAPIRVMKNLRVCQDCHNFLKYTSQLLGRDIIVRDIRRFHFFKDGLCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST