Transcript Information: S_Transcript_241239.p1


Annotated TAIR IDAT3G53270.1
Annotated Gene NameSmall nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19750406-19752168 | Reverse length=280
E-Value5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1088750514659
Replicate 24.412557911503
Replicate 33.9959261514468
Condition 2: 8 Hour
Replicate 15.8644823372116
Replicate 25.2200980159362
Replicate 33.0197450773724
Condition 3: 24 Hour
Replicate 13.0946918278342
Replicate 22.6441113505739
Replicate 34.8342251776472


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_241239.p1 GENE.S_Transcript_241239~~S_Transcript_241239.p1 ORF type:internal len:120 (+),score=18.03,SNAPc_SNAP43|PF09808.5|7e+02,SNAPc_SNAP43|PF09808.5|6.2e-08 S_Transcript_241239:2-358(+)
TCACTTGAACGGCACCATCATCACTCCTCTGTCTTTCTCCTTCTCAATCTGGCAAGCCACCAACAATCACGCCAACAACAACAACAACAACGACAACCACCAGAGCATCGTCACCATCGTCATCTTTGTTTTCACCACCGTAAGCGACCACCAACCACCACCACGAACACCACCTCAGCCTCTATTATCCCCAATCTAAGGATTGATATAAGTGCAATGGATTTATCAACATTCAAACAAGATATTGATGAGCTTTTGAAAGAGTTCGCTGAGGGGGAGCTTAAAACTGTGGCTGATATGAAAAGAGTATGGCTTGGTCGGAAGTTTTCCTACATATTTGAGGCTCGACCATCAAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_241239.p1 GENE.S_Transcript_241239~~S_Transcript_241239.p1 ORF type:internal len:120 (+),score=18.03,SNAPc_SNAP43|PF09808.5|7e+02,SNAPc_SNAP43|PF09808.5|6.2e-08 S_Transcript_241239:2-358(+)
SLERHHHHSSVFLLLNLASHQQSRQQQQQQRQPPEHRHHRHLCFHHRKRPPTTTTNTTSASIIPNLRIDISAMDLSTFKQDIDELLKEFAEGELKTVADMKRVWLGRKFSYIFEARPSN

Click here to download the sequence:
Link to NCBI Protein BLAST