Transcript Information: S_Transcript_241243.p1


Annotated TAIR IDAT3G53270.1
Annotated Gene NameSmall nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19750406-19752168 | Reverse length=280
E-Value9E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6938060442939
Replicate 28.4696016784773
Replicate 37.1673192362808
Condition 2: 8 Hour
Replicate 15.8619556321977
Replicate 25.9375522456146
Replicate 37.374677133477
Condition 3: 24 Hour
Replicate 18.3859505343039
Replicate 24.8335143172305
Replicate 38.4870386386884


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_241243.p1 GENE.S_Transcript_241243~~S_Transcript_241243.p1 ORF type:5prime_partial len:211 (-),score=47.05 S_Transcript_241243:47-679(-)
GTTGATATGTTAGCAAGAGCTGAGATTTTAGTGTTTTCTGTGTGCAAACTACTAAATTTTGGGTCTGATAGTGCACATCTCACATTGAAAAAACTCGACTGGCATTCTTATTGCATCTGGTTTCGGAAAATGTTTAAGCATTGCCTTTATTTTGTGAGTGGTCAAGACCGGAAATGCAACCCTTTTGCTGACTTCATATCATTTTGTGGAATTTTTCCCCAAGAGGCTAGTCAGTTGGTGGATGTCGAAAATATAAAGCATATAGCAGAAGATAGGCCAACAATTGGAGATGAAGTGCAGAAGATAACTGAGGAATGGAGTAACCAAAAAGACATGTACTCTCAGCAAACGGGATTAAACCAGCGTTCTGTTGTGCCTGTTCCAGAGAGAGGAGACTCTAAAAGAAGGACCGAACAGCAGCTAGGCAATGATGATGAACAGCAAGACGGAGGTTTCTTGAAGCTCTTATTGGGAATTGATTCGCCAGAGGCCAATGGCAATGGTGAACATATTCCGACTGATCAACATTCAGTTCCTCCTGAAGGAGATGACCAGCAAGATGATGAATTTGACTATGCTAAGGAACTGGAAAATCAACTATATGAAGATATACCAAGTGATTGGGACTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_241243.p1 GENE.S_Transcript_241243~~S_Transcript_241243.p1 ORF type:5prime_partial len:211 (-),score=47.05 S_Transcript_241243:47-679(-)
VDMLARAEILVFSVCKLLNFGSDSAHLTLKKLDWHSYCIWFRKMFKHCLYFVSGQDRKCNPFADFISFCGIFPQEASQLVDVENIKHIAEDRPTIGDEVQKITEEWSNQKDMYSQQTGLNQRSVVPVPERGDSKRRTEQQLGNDDEQQDGGFLKLLLGIDSPEANGNGEHIPTDQHSVPPEGDDQQDDEFDYAKELENQLYEDIPSDWDL*

Click here to download the sequence:
Link to NCBI Protein BLAST