Transcript Information: S_Transcript_241316.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value4E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7281169633234
Replicate 20.14326486725659
Replicate 30.35927407955066
Condition 2: 8 Hour
Replicate 10.69238280250432
Replicate 21.1621739553105
Replicate 30.69207297418771
Condition 3: 24 Hour
Replicate 10
Replicate 20.44150282291586
Replicate 30.16377950912413


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_241316.p1 GENE.S_Transcript_241316~~S_Transcript_241316.p1 ORF type:3prime_partial len:154 (+),score=4.87,RVT_1|PF00078.23|1.3e-23 S_Transcript_241316:1696-2154(+)
ATGCTAGGGAGAAATATAGTGGATAATATAATCATGTGTCATGAGCTGGTTGAAGGCTACACTAGAAAGCATATATCCCCCTGGTGTATGGTTAAAGTTGATTTTCAAAAGGCTTATGATAGTGTTGAATGGCCTTTCATTTACCAAATGCTCATTGAAATGGGGTTTCCAGCCCAGTTTGTTACTTGGGTGATGAGGTGCATAATTACTATGTCTTACTCAGTGTTGGTAAATGGTGAGCTAACCCCCCATTTTGAAGCAGAGAAAGGGCTTAGACAAGGGGATCCTCTTTCCCCTTATCTCTTTGTAATAGCCATGGAATACCTTAGCAGATGCTTGAAAGAGATGACAAAAAAAAAAAAAAAAAAAAAACACAAAAAACCAAAAAAAAAAAAAAAAAACAAAAATAAAAAAATTTTCCCTCCCGCCCCCAAAAAAAAACCCCGAAACGGAAAAGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_241316.p1 GENE.S_Transcript_241316~~S_Transcript_241316.p1 ORF type:3prime_partial len:154 (+),score=4.87,RVT_1|PF00078.23|1.3e-23 S_Transcript_241316:1696-2154(+)
MLGRNIVDNIIMCHELVEGYTRKHISPWCMVKVDFQKAYDSVEWPFIYQMLIEMGFPAQFVTWVMRCIITMSYSVLVNGELTPHFEAEKGLRQGDPLSPYLFVIAMEYLSRCLKEMTKKKKKKKHKKPKKKKKNKNKKIFPPAPKKKPRNGKA

Click here to download the sequence:
Link to NCBI Protein BLAST