Transcript Information: S_Transcript_241333.p1


Annotated TAIR IDAT2G40030.1
Annotated Gene Namenuclear RNA polymerase D1B
Annotated Gene Symbol(s)NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1
Annotation TypeOrtholog
Chromosome Positionchr2:16715089-16723406 | Forward length=1976
E-Value4.4E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8345208416168
Replicate 23.9164715190855
Replicate 32.1825723175859
Condition 2: 8 Hour
Replicate 15.4259868854244
Replicate 24.8979786962715
Replicate 34.7929124792266
Condition 3: 24 Hour
Replicate 12.9729723093708
Replicate 22.0115809091433
Replicate 31.4924286630246


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_241333.p1 GENE.S_Transcript_241333~~S_Transcript_241333.p1 ORF type:3prime_partial len:169 (-),score=31.87,RNA_pol_Rpb1_1|PF04997.8|4.2e-10 S_Transcript_241333:3-506(-)
ATGGAGGAAAGTGTGGCTTCAAATGTTGCTGATGGGGAGATAATAGGGATACAATTCGGTTTGGCAACCCACCTTGAGATTTGTAAATCTTCCATCAATGACTGCCCTATTAGCCATGCCAGTCAGCTTGCAAATCCTTTCCTTGGGTTGCCCTTGGAAACTGGCAAATGTGAATCCTGTGGTACGGCTGAACTTGGAAAATGTGAAGGACATTTTGGATATATTGAATTACCCATTCCAGTCTATCACCCTTCTCACATCAGTGAATTGAGACGGATGCTTAGCATACTGTGTCTGAAGTGTCTGAAGTTGAAGACGAGCAAGCCGTCAAAGAACAATGGTGTGATGGAGAGACTGTTATCAGCATGTTGTGAAGAAACATGTCATGTCTCAATAAAAGAAAGCAAGAATAATGATGGAGCATCTTTTCTTGAGCTTAGATTACCTGCCAGATTCAGAACACATGATGGTGTTTGGAACTTTCTTGAGAGATATGGTTACAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_241333.p1 GENE.S_Transcript_241333~~S_Transcript_241333.p1 ORF type:3prime_partial len:169 (-),score=31.87,RNA_pol_Rpb1_1|PF04997.8|4.2e-10 S_Transcript_241333:3-506(-)
MEESVASNVADGEIIGIQFGLATHLEICKSSINDCPISHASQLANPFLGLPLETGKCESCGTAELGKCEGHFGYIELPIPVYHPSHISELRRMLSILCLKCLKLKTSKPSKNNGVMERLLSACCEETCHVSIKESKNNDGASFLELRLPARFRTHDGVWNFLERYGYR

Click here to download the sequence:
Link to NCBI Protein BLAST