Transcript Information: S_Transcript_241534.p1


Annotated TAIR IDATCG00020.1
Annotated Gene Namephotosystem II reaction center protein A
Annotated Gene Symbol(s)PSBA
Annotation TypeOrtholog
Chromosome PositionchrC:383-1444 | Reverse length=353
E-Value2E-255
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1276695438636
Replicate 21.4957823428824
Replicate 30.20839249811978
Condition 2: 8 Hour
Replicate 10.48192972468097
Replicate 20.2527892501664
Replicate 30.1806427763134
Condition 3: 24 Hour
Replicate 10
Replicate 21.2164192653972
Replicate 30.78373584309683


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_241534.p1 GENE.S_Transcript_241534~~S_Transcript_241534.p1 ORF type:complete len:354 (+),score=7.71,Photo_RC|PF00124.15|5e-96 S_Transcript_241534:53-1114(+)
ATGACTGCTGTAATTGAACGTCGTCCGACCACATCACTTTGGGCTCGCTTCTGCGAGTGGATTACATCAACTGAAAACCGTTTATACATCGGTTGGTTCGGAGTTGTAATGATCCCAACATTATTAACTGCTGTATCAGTATACATTATCGCATTTGTTGCTGCTCCACCGGTTGATATCGACGGTATCCGTGAGCCAGTATCAGGTTCATTATTATACGGTAACAACATCATTTCTGGTGCTGTTGTTCCAACATCAAATGCAATCGGTTTACACTTCTACCCAATCTGGGAAGCTGCATCAATTGACGAATGGTTATACAACGGCGGCCCATACCAATTAGTAGTTTGCCACTTCTTATTAGGTGTTGCATGCTACATGGGTCGTGAGTGGGAATTATCATTCCGTCTTGGTATGCGTCCTTGGATTGCTGTTGCTTACTCAGCACCTGTTGCTGCTGCAACTGCAGTATTCTTAATTTACCCAATTGGCCAAGGCTCATTCTCTGATGGTATGCCATTAGGTATTAGTGGTACATTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATTTTAATGCACCCATTCCACATGTTAGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCAGCTATGCATGGTTCACTTGTTACTTCATCATTAATTCGTGAAACATGCGAAAACGAATCAGCAAACGCTGGTTACCGTTTCGGTCAAGAAGAAGAAACATACAACATTGTAGCTGCTCACGGTTACTTCGGTCGTTTGATCTTCCAATACGCTAGTTTCAACAACTCTCGTTCATTACACTTCTTCTTAGCCGCATGGCCAGTTGTAGGTATCTGGTTTACAGCATTAGGTTTATCAACAATGGCGTTTAACCTAAACGGTTTCAACTTTAACCAAAGTATCGTAGACTCACAAGGCCGTGTATTAAACTCATGGGCTGACATTATTAACCGTGCGAACCTTGGGATGGAAGTAATGCACGAGCGTAACGCGCATAATTTCCCGTTAGACCTAGCTTCAACGGAAGCACCATCAATCAATGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_241534.p1 GENE.S_Transcript_241534~~S_Transcript_241534.p1 ORF type:complete len:354 (+),score=7.71,Photo_RC|PF00124.15|5e-96 S_Transcript_241534:53-1114(+)
MTAVIERRPTTSLWARFCEWITSTENRLYIGWFGVVMIPTLLTAVSVYIIAFVAAPPVDIDGIREPVSGSLLYGNNIISGAVVPTSNAIGLHFYPIWEAASIDEWLYNGGPYQLVVCHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETCENESANAGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGLSTMAFNLNGFNFNQSIVDSQGRVLNSWADIINRANLGMEVMHERNAHNFPLDLASTEAPSING*

Click here to download the sequence:
Link to NCBI Protein BLAST