Transcript Information: S_Transcript_241727.p1


Annotated TAIR IDAT1G07090.1
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH6
Annotation TypeOrtholog
Chromosome Positionchr1:2174202-2174792 | Reverse length=196
E-Value2.7E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6697263501037
Replicate 21.9185034397839
Replicate 31.6839019902418
Condition 2: 8 Hour
Replicate 12.0398199433779
Replicate 21.2644957926802
Replicate 34.3558471192788
Condition 3: 24 Hour
Replicate 10.56986652584159
Replicate 20.78830648961208
Replicate 30.98694956367846


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_241727.p1 GENE.S_Transcript_241727~~S_Transcript_241727.p1 ORF type:complete len:230 (+),score=34.32,DUF640|PF04852.8|3.7e-62 S_Transcript_241727:309-998(+)
ATGGAAGCAGCAGGTGGAGGATCCGAGCCGAGTGGTGGCGTAGAAGGAGGCTCAACTCAACCCGGACCCGGAGGAGGAAGCGGGTCGAGTGAATTACCGGGATCATCGACATCAGGATCAGGAGGAGGAGGAGGAGCACCGCCAAGCAGATACGAGTCACAAAAGAGAAGAGACTGGAACACTTTCCTGCAATACCTGAAGAACCACAAGCCCCCGCTATCACTGTCCCGGTGCAGCGGGGCCCACGTGATCGAGTTCCTCAAGTACCTGGACCAGTTCGGCAAGACCAAGGTCCACATCTCCGAGTGTCCTTACTTCGGACATCCCAACCCACCAAGCCCCTGTGCTTGTCCTCTCAAACAAGCCTGGGGAAGCCTTGACGCTCTCATCGGCCGCCTTCGTGCCGCTTACGAGGAAAACGGAGGTCGTCCTGAGTCCAACCCCTTTGGTGCTCGTGCTGTCCGTATTTACCTCCGTGAGGTACGTGAAGCTCAGGCTAAAGCTCGCGGTATTCCTTACGAGAAGAAGAAACGGAAACGCCCTTCCGCCACTTCTACTACTACCTCTACCTCTCTTCCTGATCAGGGTGCAGGTGGGTCCGCAGCCACCGCAAGCGCTGCTGCTGCTGCTTCTTCTTCTACTGGTGATGGAGGTGGTGGTGTAGGTCCTCCTCCTACAACCACTACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_241727.p1 GENE.S_Transcript_241727~~S_Transcript_241727.p1 ORF type:complete len:230 (+),score=34.32,DUF640|PF04852.8|3.7e-62 S_Transcript_241727:309-998(+)
MEAAGGGSEPSGGVEGGSTQPGPGGGSGSSELPGSSTSGSGGGGGAPPSRYESQKRRDWNTFLQYLKNHKPPLSLSRCSGAHVIEFLKYLDQFGKTKVHISECPYFGHPNPPSPCACPLKQAWGSLDALIGRLRAAYEENGGRPESNPFGARAVRIYLREVREAQAKARGIPYEKKKRKRPSATSTTTSTSLPDQGAGGSAATASAAAAASSSTGDGGGGVGPPPTTTT*

Click here to download the sequence:
Link to NCBI Protein BLAST