Transcript Information: S_Transcript_241894.p1


Annotated TAIR IDAT1G76050.2
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28540858-28542826 | Forward length=430
E-Value4.3E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.838749593964
Replicate 210.42968233628
Replicate 312.071609072902
Condition 2: 8 Hour
Replicate 116.750124758185
Replicate 217.409365850551
Replicate 316.045019833568
Condition 3: 24 Hour
Replicate 112.233134754733
Replicate 211.208284997757
Replicate 311.097699538251


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_241894.p1 GENE.S_Transcript_241894~~S_Transcript_241894.p1 ORF type:complete len:275 (-),score=46.43,PseudoU_synth_2|PF00849.18|1.1e-23 S_Transcript_241894:63-887(-)
ATGGTTGTCCATCCTGCACCTGGAAATGCACGGGGAACCCTTGTTAATGCTGTATTAAACCACTGCAGTCTTCCCAATGTTGCAGTAACTGATGATGGATGGCTTTCTGAGGCGGAGGATATTTCAGATAATGATGTCCAAATAAATGTAGATCCTACAGATCAATTTTCCACCCAAGAGACATTTTCCTTGTCTATCCGTCCGGGCATAGTGCACAGGTTAGACAAAGGCACCAGTGGATTGCTGTTGGTCGCCAAGGATGAATATTCTCATAATCATTTGGCAGAACAGTTCAAGTCCCACACAATCAGTAGAGTTTATATAAGTCTCAACACAGGAGTGCCTACCACTACTGCTGGACGTGTTGAGGTTCCAATAGGCCGAGACACAAATAACCGAATTCGGATGACTGCTGTTGGACACAATCATTCAGGACCAGTACGACATGCTGCCAGTAGGTACAAAGTGCTTGAAGTACTAGGCAATGGGGGTGCAGCTGTGGTTGAATGGAGGCTAGAATCTGGACGTACTCATCAGATCCGAGTCCATGCAAAGTGTATCGGTATTCCTCTACTGGGAGATGATTTATATGGAGGGACTAAAGACATGGCGTTGTCGCTGCTTCATCCAAGAACTTCTGCCAACTACCATGTTCAGCTTGTTAATCTACTCTCCAGCATAGAAAGGCCTTGCCTCCATGCTATGGTTCTTGGGTTCAAGCATCCATGCACTGGCAAGTATATGCATTTCTCATGTCCTCCACCTGCTGATTTTGCTGGAGTTTTGAGTCAACTACAACGCCTTCCCAAGCAGAAGGGCGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_241894.p1 GENE.S_Transcript_241894~~S_Transcript_241894.p1 ORF type:complete len:275 (-),score=46.43,PseudoU_synth_2|PF00849.18|1.1e-23 S_Transcript_241894:63-887(-)
MVVHPAPGNARGTLVNAVLNHCSLPNVAVTDDGWLSEAEDISDNDVQINVDPTDQFSTQETFSLSIRPGIVHRLDKGTSGLLLVAKDEYSHNHLAEQFKSHTISRVYISLNTGVPTTTAGRVEVPIGRDTNNRIRMTAVGHNHSGPVRHAASRYKVLEVLGNGGAAVVEWRLESGRTHQIRVHAKCIGIPLLGDDLYGGTKDMALSLLHPRTSANYHVQLVNLLSSIERPCLHAMVLGFKHPCTGKYMHFSCPPPADFAGVLSQLQRLPKQKGA*

Click here to download the sequence:
Link to NCBI Protein BLAST