Transcript Information: S_Transcript_24225.p1


Annotated TAIR IDAT5G17230.3
Annotated Gene NamePHYTOENE SYNTHASE
Annotated Gene Symbol(s)PSY
Annotation TypeOrtholog
Chromosome Positionchr5:5659839-5662087 | Reverse length=437
E-Value7.3E-218
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1313.47713331416
Replicate 2335.34392013904
Replicate 3342.04485354098
Condition 2: 8 Hour
Replicate 1206.16232444354
Replicate 2196.88289598619
Replicate 3209.61427336015
Condition 3: 24 Hour
Replicate 1375.77350650566
Replicate 2364.28981695283
Replicate 3422.66395077932


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24225.p1 GENE.S_Transcript_24225~~S_Transcript_24225.p1 ORF type:complete len:421 (+),score=93.57,SQS_PSY|PF00494.15|1.3e-76 S_Transcript_24225:356-1618(+)
ATGAGTATGTCTGTGGCTTTACTATGGGTTGTATCTCCAACAACAGAAGTGTACAATGGGTTTAGTGTTTCGGATTCATTGGCTCCTCGTTCAATATATGATGGAAAATCAAGGAAATTGTGTAAGAAGAAATCCCACAAGTGGAATCCTGTAGGAAAACAAAACAGGAGGATTGGATTTCCTGTGGTATCCAGCATGGTGGCAAATCCTGCCGGAGAAATGGCGGTTTTGACATCGGAACAGAAGGTGTATGATGTAGTTCTAAAGCAAGCTGCCTTGGTTAATAAACAATTGAGGTCGAGGGACGATGATCTTGATCTTGATCTTGATGTTAAGCCAGATATTGCTGTTCCGGGGACCTTGAGCTTGCTTGGTGAGGCTTATGATAGATGTGGTGAAGTTTGTGCTGAGTATGCCAAGACTTTTTACTTGGGAACTCAGCTTATGACTCCTGAGAAAAGAAGGGCTATTTGGGCAATTTATGTGTGGTGTAGAAGGACAGATGAGCTTGTCGATGGGCCAAATGCGTCACACATAACACCAACTGCTTTGGATAGGTGGGAGGCAAGGTTGGAAGATCTCTTTAGAGGCCGTCCATTCGATATGCTTGATGCTGCTTTGTCAGATACCGTGGCCAGGTTCCCTATTGACATCCAGCCTTTCAAAGATATGATTGAAGGAATGAGGATGGATCTTAGAAAGTCGAGATACAGAAACTTTGATGAATTGTACCTATATTGTTATTATGTAGCCGGGACGGTTGGATTGATGAGTGTTCCTGTGATGGGTATTGCACCTGAATCGAAGGCAACTACAGAAAGCGTCTACAATGCTGCCTTGGCATTGGGGATCGCGAATCAACTCACTAACATATTGAGAGATGTTGGAGAAGATGCAAGGAGAGGCAGGGTTTATTTGCCGCAAGATGAATTGGCACAGGCAGGTCTGTCAGATGAAGACATATTTGCTGGAAAGGTAACTGATAAATGGAGGACATTCATGAAGAAACAGATCAAACGAGCTAGGATGTTCTTTGATGAAGCCGAGAAAGGAGTCACAGAGCTTAGTGCAGCTAGCAGATGGCCTGTCTGGGCATCACTGCTTCTTTACCGTCAAATACTGGATGAGATCGAAGTAAATGATTACAACAACTTCACCAAGAGGGCTTATGTTAGCAAAGGCAAGAAGCTACTCGCGTTGCCAATTGCTTATGCCAAGTCCGTGGTTTCTCCATCGAGAACATCTAGTCTTGCAAAAGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24225.p1 GENE.S_Transcript_24225~~S_Transcript_24225.p1 ORF type:complete len:421 (+),score=93.57,SQS_PSY|PF00494.15|1.3e-76 S_Transcript_24225:356-1618(+)
MSMSVALLWVVSPTTEVYNGFSVSDSLAPRSIYDGKSRKLCKKKSHKWNPVGKQNRRIGFPVVSSMVANPAGEMAVLTSEQKVYDVVLKQAALVNKQLRSRDDDLDLDLDVKPDIAVPGTLSLLGEAYDRCGEVCAEYAKTFYLGTQLMTPEKRRAIWAIYVWCRRTDELVDGPNASHITPTALDRWEARLEDLFRGRPFDMLDAALSDTVARFPIDIQPFKDMIEGMRMDLRKSRYRNFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRTFMKKQIKRARMFFDEAEKGVTELSAASRWPVWASLLLYRQILDEIEVNDYNNFTKRAYVSKGKKLLALPIAYAKSVVSPSRTSSLAKV*

Click here to download the sequence:
Link to NCBI Protein BLAST