Transcript Information: S_Transcript_242294.p1


Annotated TAIR IDAT1G47370.1
Annotated Gene NameToll-Interleukin-Resistance (TIR) domain family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:17365898-17368703 | Reverse length=363
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49810430119322
Replicate 20.41293991150429
Replicate 30.14793638569733
Condition 2: 8 Hour
Replicate 10.51317784185614
Replicate 20.47854221689255
Replicate 30.45595395946484
Condition 3: 24 Hour
Replicate 10.58408779386615
Replicate 20.18179528002418
Replicate 30.53950897123243


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_242294.p1 GENE.S_Transcript_242294~~S_Transcript_242294.p1 ORF type:complete len:374 (-),score=62.59,Retrotrans_gag|PF03732.13|8.2e+02,Retrotrans_gag|PF03732.13|6.1e-20,zf-CCHC|PF00098.19|1.2e-05 S_Transcript_242294:251-1372(-)
ATGCCGCCAAGAGGACGTCGTGGAAGAGTTCACCAATCTCGTCCTGTTCATGATGCTATTTCAGCAGACATGCAACGAGAAATTCAAAGACTCCAACAACGTCTTGCTCAATATGAAGTATCTGCGGGTACTTCTCATGAATCAGAAGGTGAATCATCTAATAATAATATTGAGCCTAATGAGGATGAAAATCCTTTTAGTCAATCAAGAAATGATTCGTCAAGTACAGAAGAGTCAACTTCACAGCACGTTCGTCGCCCCCAGTTCAATGAACGAGAATTGGGAATAAAAATTGAAATTCCCGATTTTGAAGGAGGCATTCATCCTGAAGAATTTATTGAATGGCTCCATACGGTAGAACGAGTTTTTGATCTTAAAGACATTCCCGATGATCGTAAGGTCAAATTGGTAGCCATTAAACTCAAAAGGCATGCATCCATTTGGTGGGAGAATCTGAAGCGCCAAAGAGAAAGAGAAGGTTGTAGAAAAATCCGGACATGGGATAAAATGAAGCGTGAGCTCAAACGCAAATTTTTACCCAGTCATTATCGTCAGGATATTTTCCTCAAGTTTCACAATCTCAAACAAGGAGGAAAATCTGTTGCTGAATATGCTGCCGAATTCGAAGATTTGGCAATGAAGTGTGATAATTCAGAACCAGAGGAGCAAGTCATTGCCAGATTCCTAGCAGGTCTAGATCTGAAAATCGCTAATGTTGTACAACTCCAACAATATTGGACGTTTAACGACGTCATAAAATTATCCTTAAAAGTTGAAAAACAACAAAAGGATAAAGAAGTATTCCAAGAAACTTTTAAAGATCCACCCACATATGGGGATGATTCCGCAAGCCCACCATTAAAAGCCACTACCAGCATTCCACCAAAGAAAGATGAAGTTCCAGCTAGGACAAGCAAGCCTACATCAGGAAGCTCCCGCATGAGAAAATGCTTTAAATGTCAAGGCTTTGGACATATTGCATCTGAGTGTCCCAATACTAGAATAATCTCCTTTGTTGAGGAAGAAATACCGGTAGAAGAAGCGACCATTGGAGAAGAAGTTTTTAAAGATGAGAAAGAGCAAAGACTCGAGGTCGAGTCTTCTCCAACAAGGGGAGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_242294.p1 GENE.S_Transcript_242294~~S_Transcript_242294.p1 ORF type:complete len:374 (-),score=62.59,Retrotrans_gag|PF03732.13|8.2e+02,Retrotrans_gag|PF03732.13|6.1e-20,zf-CCHC|PF00098.19|1.2e-05 S_Transcript_242294:251-1372(-)
MPPRGRRGRVHQSRPVHDAISADMQREIQRLQQRLAQYEVSAGTSHESEGESSNNNIEPNEDENPFSQSRNDSSSTEESTSQHVRRPQFNERELGIKIEIPDFEGGIHPEEFIEWLHTVERVFDLKDIPDDRKVKLVAIKLKRHASIWWENLKRQREREGCRKIRTWDKMKRELKRKFLPSHYRQDIFLKFHNLKQGGKSVAEYAAEFEDLAMKCDNSEPEEQVIARFLAGLDLKIANVVQLQQYWTFNDVIKLSLKVEKQQKDKEVFQETFKDPPTYGDDSASPPLKATTSIPPKKDEVPARTSKPTSGSSRMRKCFKCQGFGHIASECPNTRIISFVEEEIPVEEATIGEEVFKDEKEQRLEVESSPTRGV*

Click here to download the sequence:
Link to NCBI Protein BLAST