Transcript Information: S_Transcript_242377.p1


Annotated TAIR IDAT5G55540.1
Annotated Gene Nametornado 1
Annotated Gene Symbol(s)TRN1, LOP1
Annotation TypeOrtholog
Chromosome Positionchr5:22496322-22500543 | Reverse length=1380
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2123059130993
Replicate 20.84550097364301
Replicate 30.69343620849402
Condition 2: 8 Hour
Replicate 10.74014369864236
Replicate 21.0838133469716
Replicate 31.1867825492289
Condition 3: 24 Hour
Replicate 10.64760681353171
Replicate 20.75382164317569
Replicate 30.94833427987421


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_242377.p1 GENE.S_Transcript_242377~~S_Transcript_242377.p1 ORF type:complete len:1383 (+),score=238.59,COR|PF16095.1|1.5e-15 S_Transcript_242377:226-4149(+)
ATGAAAAAAAACAGCAGTACAGCTCCCTTAAGAAACTTGGAGTTCCACAGAGTTTGTTGGGAGGTTGAGTACCTCCACAGCCTTAGGTCATTGCTCGAAAACAACCCGGGGATTAAGCATATCGCGTTTCGGAGGAATTACTTCAGTTTAGACTGCTTGAAGGAGTTGTCAGAGCTTCTGAAAAGGGATGAAAATGTGAAGGAAATCATGTTCTGGGAGTCAAACATAGGAACAAGAGGAACTGAGCTGATGGCTTCTGCTCTGAAGGTGAATGACAGCTTAGAAGAGCTCCAAATATGGGAAGATTCAATAGGGTTAAAAGGGTCAGAAGAGCTAGCTAAGACGATTGAAGTGAACATATCTCTGAAACTTTTGACAGTCTTTGATTTGAGCTTTATCACAGCAACGCCGTTGATATCAGCAGTTTTGGCTAGGAATAGAGAAATGGAGGTACACATTTGGAGTGGTGGGAATGGTAAAAACAGCTCAAAAGTGGTGGAATTTGTGCCTGAAAATGGGAATCTAAGGATATATAGGCTTGACATATCAGGTGCTTGCAGGGTTACATGTGCTCTGGGGATGAATACAACAGTCCGAACTCTCGACATGACAGGTGTCAGACTGAAATCACAGTGTGCAAAAGAGTTCAGATGGGTTTTAGAACAGAACAGAACTCTGAGAGAAGTGAAACTGTCAAGATGTTGTTTGAAAGATAAAGCAATAGTTTATGTATCAGCAGGGTTATTTAAGAACAGAAGCTTGGAAAGTTTGTGTGTTGATGGGAATTGGTTTAAAGGGGTTGGAGTAGAACATTTGCTTTGCCCATTAAGCAGGTTTTCACCTCTTCAATGTCAAGCAAATATTACATTGAAAAGTCTTACATTTGGTGGTGAGAAGACAAGGATAGGAAGGGAAGGGCTCGAGGCGATCCTAAGGATGATCACAACCAATCAGAGCTTGACGCGACTTGGAATTCATGATGATCAGGGCTTGAGGCCATATGAGATTGTCACCATTTTTAAAAGTTTGGAGAAAAATGCTTCTTTGAAGTGTTTGTCTCTACAGGGTTGTAAGGGGGTTCAAGGAGAATCGGTTTTAAAGGCGATAATGGAGACCTTACAGGTTAATCCTTGGATCGAGGACATTGATCTTGATAGAACACCATTGCAAGAAGCAGGAATGACAGAAGGGATATACCAGAGATTAGGTCAGAATGCGAAGTTTGAACCAGATGAGGATTTGCTTAGAGACATGGCTATGACTACGCCTAAGAGCTGTAGGGTCTTCTTATGTGGGCAAGAATATGGAGGTAAAACCACACTCTGCAATTCGATATCTCAGAATTTTTCATCAACCAAGTTACCCTACATAGACCAAGTTCGAACTCTAGTAAACCCAGTTGAGCAAGCTGTAAGATCAGAAGGGATGAAAATCAGAACCTTCAAAGATGAAGGCACAAAGATTTCTGTGTGGAATCTGGCAGGACAACATGAACTCTATTCTCTGCAAGATCTCATGTTCCCGGGGCATGGGAGTGCATCCTTTTTCCTCATCATATCGAGTTTGTTTCGAAAGCCAAGCAACAAAGAGCCTAAATCTCCATCGGAAATTGAAGAAGACCTACAATATTGGCTTAGGTTCATAGTCTCTAATTCAAGAAGGGCAGTTCAACAATGCATGCTACCTAATGTAACCATAGTCCTTACACACAGTGACAGGATCAATCAATCCTCGGAGAACTTTCAAGCCACTGTAAACGCAATCCAGAGAGTCAGAGACAAGTTTCAAGGCTTAGTCGAATTTTATCCAACTGTATTTACAGTCGATGCAAGATCATCAGCATCAGTGAGCAAACTTTCTCAACATATAAGAAACATGAGCAAGATAATCCTACAAAGAGTTCCTCGAGTTTACGAGCTCTGCAATGATTTAGTGCAAATCCTGTCAGATTGGAGATCAGAAAACCACAACAAACCTGCTATGGCTTGGAGAGAATTCAGTGAGCTGTGCCAAGCTAAGATTCCAGCCTTGAGAGTACGTTCGAGGTCTGAGAACAAAGAAAGGACTGAAATGAGGAGGAAAGCTGTTGCTAGCTGCTTACATCATATAGGAGAGGTACTTTACTTTGAAGATCCCGGGTTCTTGATCCTAGACTGTGAATGGTTTTGTGAGGAAGTTCTTGGACAGTTAGTACGATTAAATGCTCGAAGGCAAAGCTTAATCAGGGATGGGTTCATCAGCAGGAAAGACTTGGAAAAAATTCTGAGAGGAAGTTTGCAAAGTCAGATTCCTGGGGTGGGTGGTTCTAAGGTTTTCGAGAATTTGGAGGCTAGTGATCTTGTGAGGATGATGCTCAAGTTGGAACTCTGCTATGAAAAAAACCCATCTGACCCGAATTCTCCTGTACTAATCCCTTCACTTCTCGAAGAGGGAAGACAAAAACCTCAAAAATGGCAGTTCAGCTCTTCTGATTGTGTCTATGCAGGACGCCATCTTGAATGTGATGATTCAAGCCATATGTTCCTCACTCCAGGCTTCTTTCCTCGACTGCAGGTGCATCTCCACAACAAAATCACTGCATTGAAGGAGCAGCACGGAGCAACATACAAGCTTGAAAAGTATCTCATCTCAATCAATATCAATGGCATTGATGTTAGAGTGGAGCTCGGAGGGCAATTGGATTATTACATCGATATCTTAGCATGCTCGACCAAGAATCTAACAGAAACACTCCGGCTCATCCACCAGCTCATAATCCCTGCAATCCAGAGCCTCTGCCAAGGAGTTCTGCTGATTGAGAACATTATCCGACCAGATTGTGTAAGAAATTTAACACCTCCAAGGTACAGAAAAACCCAGTTTGTTGGACTGCAGAGAATAAAAGAAGCACTTCTCTCAGTTCCAGCAGACGGCATGTATGACTATCAGCATACTTGGAGTGCAGTATCTGATGCAGGCAAATCTATCTTAAGAGCAGGCTTTGATTTTGCGAGAGACCTTCTTTCGGAAGATGATTTCCGAGAAGTACTTCATCGGAGATATCATGATCTGTACAACTTGGCCAACGAACTTCAGGTCAGACCAGAAGAAATCGACAACCAAAGTGGTTCTTCCAACGCAGAACTCGACCCTAAAGTTGATCCTTCATTCAGTGGGATAGCGAAGGGAGTGGAGCAAGTGTTACAGAGGCTAAAGATCATCGAACAGGAGATAAGAGATCTGAAGCAAGAGATACAAGGGCTGAGATACTATGAGCACAGGCTCTTAATTGAACTTCACCGAAAGGTGGACCATTTAGTGAGCTACAATGTACAAATCGAAGAGCGGAAAGTGCCCAACATGTTCTTCTTTGTGAGAACAGAAAACTACTCCAGGAGACTTGTGACCAATATCATATCAGGAATGACTGCCTTGCGACTCCATATGTTATGCGAGTTCAGAAGAGAGATGCATGTAGTCGAAGACCAGATGGGGTGTGAAATTATGCAGGTTGACAACCTGGCAGTGAGATGCTTGTCACCCTACATGACCAAATTCATGAAGCTGTTAACATTCGCATTGAAAATAGGTGCACATTTAGCAACAGGAATGGGATCCATGATACCTGATTTGAGCAAGGAAGTCGCACATTTGCTTGACTCTTCCCTTGCAACAGGAGCGGCTGGGGCAGCAGCTGCAGGGGCAGTTGGGGCAATGGCGATGGGAAGTACTGGCCGGACAAATCAAGATATTCAGCAGGATCAGAGAGCAGCACAGCAATGGGTTCTTGATTTCTTGAGGGACCGGAGGTGCTCAAGTGGGAGAGATATTGCTGAGAAGTTCGGCTTGTGGAGGGTCCGATATAGGGATACTGGCCAAGTTGCATGGATTTGCAGGAGGCACATGAGTTTAAGAGCTCATGAAATAGTTGAACTGCCCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_242377.p1 GENE.S_Transcript_242377~~S_Transcript_242377.p1 ORF type:complete len:1383 (+),score=238.59,COR|PF16095.1|1.5e-15 S_Transcript_242377:226-4149(+)
MKKNSSTAPLRNLEFHRVCWEVEYLHSLRSLLENNPGIKHIAFRRNYFSLDCLKELSELLKRDENVKEIMFWESNIGTRGTELMASALKVNDSLEELQIWEDSIGLKGSEELAKTIEVNISLKLLTVFDLSFITATPLISAVLARNREMEVHIWSGGNGKNSSKVVEFVPENGNLRIYRLDISGACRVTCALGMNTTVRTLDMTGVRLKSQCAKEFRWVLEQNRTLREVKLSRCCLKDKAIVYVSAGLFKNRSLESLCVDGNWFKGVGVEHLLCPLSRFSPLQCQANITLKSLTFGGEKTRIGREGLEAILRMITTNQSLTRLGIHDDQGLRPYEIVTIFKSLEKNASLKCLSLQGCKGVQGESVLKAIMETLQVNPWIEDIDLDRTPLQEAGMTEGIYQRLGQNAKFEPDEDLLRDMAMTTPKSCRVFLCGQEYGGKTTLCNSISQNFSSTKLPYIDQVRTLVNPVEQAVRSEGMKIRTFKDEGTKISVWNLAGQHELYSLQDLMFPGHGSASFFLIISSLFRKPSNKEPKSPSEIEEDLQYWLRFIVSNSRRAVQQCMLPNVTIVLTHSDRINQSSENFQATVNAIQRVRDKFQGLVEFYPTVFTVDARSSASVSKLSQHIRNMSKIILQRVPRVYELCNDLVQILSDWRSENHNKPAMAWREFSELCQAKIPALRVRSRSENKERTEMRRKAVASCLHHIGEVLYFEDPGFLILDCEWFCEEVLGQLVRLNARRQSLIRDGFISRKDLEKILRGSLQSQIPGVGGSKVFENLEASDLVRMMLKLELCYEKNPSDPNSPVLIPSLLEEGRQKPQKWQFSSSDCVYAGRHLECDDSSHMFLTPGFFPRLQVHLHNKITALKEQHGATYKLEKYLISININGIDVRVELGGQLDYYIDILACSTKNLTETLRLIHQLIIPAIQSLCQGVLLIENIIRPDCVRNLTPPRYRKTQFVGLQRIKEALLSVPADGMYDYQHTWSAVSDAGKSILRAGFDFARDLLSEDDFREVLHRRYHDLYNLANELQVRPEEIDNQSGSSNAELDPKVDPSFSGIAKGVEQVLQRLKIIEQEIRDLKQEIQGLRYYEHRLLIELHRKVDHLVSYNVQIEERKVPNMFFFVRTENYSRRLVTNIISGMTALRLHMLCEFRREMHVVEDQMGCEIMQVDNLAVRCLSPYMTKFMKLLTFALKIGAHLATGMGSMIPDLSKEVAHLLDSSLATGAAGAAAAGAVGAMAMGSTGRTNQDIQQDQRAAQQWVLDFLRDRRCSSGRDIAEKFGLWRVRYRDTGQVAWICRRHMSLRAHEIVELPL*

Click here to download the sequence:
Link to NCBI Protein BLAST