Transcript Information: S_Transcript_242438.p1


Annotated TAIR IDAT4G35840.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16981083-16982266 | Forward length=236
E-Value5.9E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 150.60833021772
Replicate 254.162339938325
Replicate 356.38639802609
Condition 2: 8 Hour
Replicate 174.114471266102
Replicate 280.868731558356
Replicate 377.400987614809
Condition 3: 24 Hour
Replicate 150.225326386161
Replicate 250.529153678414
Replicate 344.138577708953


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_242438.p1 GENE.S_Transcript_242438~~S_Transcript_242438.p1 ORF type:complete len:244 (+),score=45.69,zf-RING_2|PF13639.2|2.2e-12,zf-RING_11|PF17123.1|1.5e-08,Gly-zipper_YMGG|PF13441.2|5.8e-07,zf-rbx1|PF12678.3|1.3e-06,Gly-zipper_OmpA|PF13436.2|8.4e-06 S_Transcript_242438:46-777(+)
ATGGAGTTCTACCCACATCCATCGCATCGATCAATTGGAGTTCCATCTTCTTCTTCTTCTTCTTCATCATCAGTTCTTTATAATTTGGGCGATAAAATTCGAGCTATCCTCAATTTCGCCATCTCTGCTATTCTCGGCAATCTCTTCTCCGCCTTCTTCACTTTCTGTTTCGCTTTAGTTGGGACACTATTGGGAGCAATGACGGGGGCTTTGATAGGGCAAGAGACAGAGAGTGGGTTTATAAGAGGAGCCGCCATTGGAGCTATCTCTGGGGCTGTTTTCTCCATTGAAGTCTTTGAATCTTCTGTTGTTCTTTGGCGTTCCGATGAATCTGGCCTTGGCTGTCTCCTTTACCTGATTGATGTAATTGCAAGCCTTTTGAGTGGTAGGCTTGTTCGTGAGCGTATCGGTCCAGCTATGTTGAGTGCTGTACAAAGTCAGATGGGTGCAGTGGAAACAAATTTCGATGAAGTTACCAATATCTTCGACACTGGTGGGTCGAAAGGTTTACCTGGGGATTTAGTTGAAAAGATACCCAAGATCATAATCACCCACAAGAACAACATTGATGCTTCAGGGGAGAAAGTTTCTTGTTCAGTTTGTCTGCAGGACTTCCAAATTGGTGAGACGGTCCGAAGTTTGCCTCATTGCCACCATATGTTTCATCTTCCTTGCATCGACAAATGGCTGCTGAGGCACGGTTCCTGCCCCTTATGCAGAAGGGATTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_242438.p1 GENE.S_Transcript_242438~~S_Transcript_242438.p1 ORF type:complete len:244 (+),score=45.69,zf-RING_2|PF13639.2|2.2e-12,zf-RING_11|PF17123.1|1.5e-08,Gly-zipper_YMGG|PF13441.2|5.8e-07,zf-rbx1|PF12678.3|1.3e-06,Gly-zipper_OmpA|PF13436.2|8.4e-06 S_Transcript_242438:46-777(+)
MEFYPHPSHRSIGVPSSSSSSSSSVLYNLGDKIRAILNFAISAILGNLFSAFFTFCFALVGTLLGAMTGALIGQETESGFIRGAAIGAISGAVFSIEVFESSVVLWRSDESGLGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVETNFDEVTNIFDTGGSKGLPGDLVEKIPKIIITHKNNIDASGEKVSCSVCLQDFQIGETVRSLPHCHHMFHLPCIDKWLLRHGSCPLCRRDL*

Click here to download the sequence:
Link to NCBI Protein BLAST