Transcript Information: S_Transcript_242442.p2


Annotated TAIR IDAT4G35840.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16981083-16982266 | Forward length=236
E-Value9.7E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.333400850902
Replicate 220.755364991144
Replicate 315.027414586637
Condition 2: 8 Hour
Replicate 128.433853756177
Replicate 224.194740010371
Replicate 321.63163793987
Condition 3: 24 Hour
Replicate 115.210511467525
Replicate 214.605567460313
Replicate 319.430315689867


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_242442.p2 GENE.S_Transcript_242442~~S_Transcript_242442.p2 ORF type:complete len:135 (+),score=26.79,zf-RING_2|PF13639.2|7.4e-13,zf-RING_11|PF17123.1|5.9e-09,zf-rbx1|PF12678.3|7.5e-07,zf-C3HC4_2|PF13923.2|7.7e-06 S_Transcript_242442:889-1293(+)
ATGTTGCTTATTTTTGTTAGGGATTTGCAGATTGATGTAATTGCAAGCCTTTTGAGTGGTAGGCTTGTTCGTGAGCGTATCGGTCCAGCTATGTTGAGTGCTGTACAAAGTCAGATGGGTGCAGTGGAAACAAATTTCGATGAAGTTACCAATATCTTCGACACTGGTGGGTCGAAAGGTTTACCTGGGGATTTAGTTGAAAAGATACCCAAGATCATAATCACCCACAAGAACAACATTGATGCTTCAGGGGAGAAAGTTTCTTGTTCAGTTTGTCTGCAGGACTTCCAAATTGGTGAGACGGTCCGAAGTTTGCCTCATTGCCACCATATGTTTCATCTTCCTTGCATCGACAAATGGCTGCTGAGGCACGGTTCCTGCCCCTTATGCAGAAGGGATTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_242442.p2 GENE.S_Transcript_242442~~S_Transcript_242442.p2 ORF type:complete len:135 (+),score=26.79,zf-RING_2|PF13639.2|7.4e-13,zf-RING_11|PF17123.1|5.9e-09,zf-rbx1|PF12678.3|7.5e-07,zf-C3HC4_2|PF13923.2|7.7e-06 S_Transcript_242442:889-1293(+)
MLLIFVRDLQIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVETNFDEVTNIFDTGGSKGLPGDLVEKIPKIIITHKNNIDASGEKVSCSVCLQDFQIGETVRSLPHCHHMFHLPCIDKWLLRHGSCPLCRRDL*

Click here to download the sequence:
Link to NCBI Protein BLAST