Transcript Information: S_Transcript_24247.p1


Annotated TAIR IDAT5G05760.1
Annotated Gene Namesyntaxin of plants 31
Annotated Gene Symbol(s)SYP31, ATSED5, ATSYP31, SED5
Annotation TypeOrtholog
Chromosome Positionchr5:1729111-1730903 | Reverse length=336
E-Value1.7E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85848391081227
Replicate 20.71170288895209
Replicate 30.47594157635098
Condition 2: 8 Hour
Replicate 10.55033265334537
Replicate 22.1650176102961
Replicate 31.5127375719664
Condition 3: 24 Hour
Replicate 10.98654312538167
Replicate 21.1697451136179
Replicate 31.3017829370383


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24247.p1 GENE.S_Transcript_24247~~S_Transcript_24247.p1 ORF type:5prime_partial len:155 (+),score=37.69 S_Transcript_24247:2-466(+)
ATCGACCGCCTCTCTCTCTTGGCAAAAAAGTCTTCAATGTTTGATGACCCAACAGTGGAGATACAAGAATTAACAGACTTGATAAAAAATGATATCACGGCGCTGAATGTAGCAGTTGCAGATCTACAAACACTTGAAAACATGGAAATAGCTAATGGAAACTATTCTGAGGATGAGGTTGTTCATGCAAATGCTGTTTGTAATGATGTAAAGAACAGACTAATGGCAGCTACGAAGAAGTTCCAGGATGTGTTGACTGCTAGAACACAGAACATCAAGGCTCATGAAAGCAGGAAACAAATATTTTCTGCTAGTGCATCAAGAGACAACCCTATCCAACACCATCCCAAACCTATTATGGAGCCACCTCCATGGTCAAATTCAACTAATGTGCCTGGAAGCTTGCAACCTGCTCCTTCAGTGATTTCCTTTTCCAAGATTTCCATTCTACTATTGTGCTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24247.p1 GENE.S_Transcript_24247~~S_Transcript_24247.p1 ORF type:5prime_partial len:155 (+),score=37.69 S_Transcript_24247:2-466(+)
IDRLSLLAKKSSMFDDPTVEIQELTDLIKNDITALNVAVADLQTLENMEIANGNYSEDEVVHANAVCNDVKNRLMAATKKFQDVLTARTQNIKAHESRKQIFSASASRDNPIQHHPKPIMEPPPWSNSTNVPGSLQPAPSVISFSKISILLLCS*

Click here to download the sequence:
Link to NCBI Protein BLAST