Transcript Information: S_Transcript_242598.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value3E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.075390938343288
Replicate 20.062500820276246
Replicate 30
Condition 2: 8 Hour
Replicate 10.12082374117356
Replicate 20.3802580505336
Replicate 30.3019241870394
Condition 3: 24 Hour
Replicate 10
Replicate 20.12840686445523
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_242598.p1 GENE.S_Transcript_242598~~S_Transcript_242598.p1 ORF type:5prime_partial len:353 (+),score=54.10,RVT_1|PF00078.23|7.9e-29 S_Transcript_242598:3-1061(+)
AAGGCCTATGACACAGTGGATTGGCAGTTTGTGCAGAGAGCCCTCTTCTATTTTGGCTTTCCCAGGGAGTTTGTGGATAGGGTGATGCTTTGTATAAGCTCAGCTCAATTTTCAATTAATTTGAATGGTGGCTTGAAAGGTTTCTTTAAAGGAGGATGTGGTTTGAGACAAGGGGATCCCATGTCCCCTTACTTGTTTGTTCTTTGTATGGAGATTTTATCGAGAATGTTAAGGAAGTGTTTCAATCAAAGAGGTTTTTCTGCCCACCCTAAATGCCATAGGGTAAAGTTGAATCACCTTGCATTTGCAGATGATCTACTACTATTCTGCAGAGGTGATATGGAGGCTGTGAAGGTCATGGATTCCACATTCAAGCTTTTCTCAAATATGTCAGGACTCTATGCTAACCAAAGCAAGAGTAATATTTACTTTGGAGGGGTAGAGATGCAAGTGGAGAAAGAGATACTTGAGGCTACTGGCTATAGTAAAGGGGATCTGCCTTTCAAATATTTGGGTGTCCCCTTAACTACCTCAAGACTTACTAAAGCGTTATGCCAACCTTTGCTGATGAAAATTAAGAAGAAAATCCACCACTGGTCCACTGTTCTGCTGAGCTATGCAGGAAGGGTTCAGCTCTTAAGAGCAGTGATTTTTGCAGTCCAAGTATACTGGTGTTCAGTGTTCTTGCTACCAAAGGAGGTGATTTATGAGATACAGAGGATGAGTAGAAGATTCTTATGGGGTCAGAGAGAGGAGAAGAAACATTACTTAGCACCTATTGGATGGGACATAATCTGTAAACCGAGAGAGGAGGGAGGATTGGGTATGGTGGACATGGCAGTTTGGAACAAGGCTATCATATGCAAGTGGATTCAGTGGATGGACAACAGACACAAAGCAAGTTGGGTCAGATGGTGTGAAGCCTACTATACTAGAGGAGAGAGTTTTTGGACTTGTAAGGGGAAAACTAATGCTTCTTGGCTCTGGAAAAGAATGCAAATAGTAAAGGAATACCTGATCAAAGATACAGGCAGTGAGCAAATGCTTTCAACACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_242598.p1 GENE.S_Transcript_242598~~S_Transcript_242598.p1 ORF type:5prime_partial len:353 (+),score=54.10,RVT_1|PF00078.23|7.9e-29 S_Transcript_242598:3-1061(+)
KAYDTVDWQFVQRALFYFGFPREFVDRVMLCISSAQFSINLNGGLKGFFKGGCGLRQGDPMSPYLFVLCMEILSRMLRKCFNQRGFSAHPKCHRVKLNHLAFADDLLLFCRGDMEAVKVMDSTFKLFSNMSGLYANQSKSNIYFGGVEMQVEKEILEATGYSKGDLPFKYLGVPLTTSRLTKALCQPLLMKIKKKIHHWSTVLLSYAGRVQLLRAVIFAVQVYWCSVFLLPKEVIYEIQRMSRRFLWGQREEKKHYLAPIGWDIICKPREEGGLGMVDMAVWNKAIICKWIQWMDNRHKASWVRWCEAYYTRGESFWTCKGKTNASWLWKRMQIVKEYLIKDTGSEQMLSTL*

Click here to download the sequence:
Link to NCBI Protein BLAST