Transcript Information: S_Transcript_242894.p1


Annotated TAIR IDAT2G18710.1
Annotated Gene NameSECY Homolog 1
Annotated Gene Symbol(s)SCY1
Annotation TypeOrtholog
Chromosome Positionchr2:8112231-8114452 | Reverse length=551
E-Value2.2E-251
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.909694593052
Replicate 219.059914608288
Replicate 323.60251857958
Condition 2: 8 Hour
Replicate 124.872903262138
Replicate 227.954238092362
Replicate 324.096175553457
Condition 3: 24 Hour
Replicate 119.821444377099
Replicate 219.322077544296
Replicate 323.219538044029


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_242894.p1 GENE.S_Transcript_242894~~S_Transcript_242894.p1 ORF type:complete len:529 (+),score=64.01,SecY|PF00344.16|1.8e-76 S_Transcript_242894:120-1706(+)
ATGTTGGCAACAGTTTCAGAGTCATTAGCAACTACATCTTCTCTCACCTCATTCTCTCTCCCTCGAAACTCCCTTCACAAACCCAACAAATGGGTTTGCAAGTCCACCCTTGGCTTTGGTGTTGCCTTCCGCAACAAACCCAAACCCAAACCCAAACCCATTTCTTGCAAAGCTGCTTCAGTCTCATCTACAAACAGCTGCGAAAGTTCAGTGTTTGATCCCTTGGGTATCAATCCAGATGAATCATGGGGTCTAGCTAGTGCCTGGGATAGTGTACTGGGCTATTTTGCAGAGACTTTTGAGGGTGCCTCGGGTACGAGAAAAGACAGATCGGCGTCCGCTCGTGGAGTTGCAGCTGCAATTGAGGATAGTTCCATTGATTTCGGGGACTTCTTTAAGGGCCCATTACCGGGGAAATTTCTTAAACTGTTGGGCTATTTGGCCTTATCTCGGCTTGGGATATATGTGCCTCTTGGTGGCGTGAACCGTGAGGCCTTCGTAGGCAACTTGGATCAGAACAGTTTTATCAGCACTCTGGACTCCTTTTCTGGTGGTGGCATTGGACGACTTGGGATATGCTCCCTGGGAATTGTTCCCTTCATCAATGCCCAGATTGTATTTCAACTGCTTGCACAAGTCTACCCAAAGTTGCAGGACCTCCAGAAAAAAGAAGGTGAAGCAGGCAGGAAGAAGGTTCTGCAGTATACCCGCTATGCATCCGTTGGGTTTGCTTTAGTGCAGGCTATTGGGCAAGCGTTTTTCCTTCGTCCCTATGTCAGTGACTTCAGTACTGAGTGGGTTGTTTCATCTGTTATACTGTTAACACTTGGTTCAGTATTTACAACCTACCTAGGGGAACGTATATCTGACCTAAAACTTGGAAACGGTACATCACTACTAATCTTCACCAACATCATATCGTACTTGCCAGCGTCCTTTGGAAGGACAATTGAACAGGCATATCAAGAGGGGAATTACACCGGACTGGCCCTCATAATAGCATCCTTTGTATCTTTGGTGTTTGGTATTGTTTACGTTCAGGAAGCAGAGAGGAAAATTCCACTGAATTATGCATCAAGATATTCTGGTAGAAGTGGGGGACTTCAAAAGTCTGCTTATTTACCCTTTAAGGTGAATAGTGCTGGGGTAATGCCTATCATATTCTCAACGTCATCATTCGCACTTCCGGGTACACTGGCTCGGTTTGCTGGTTTAGGCGTCCTGAAGAAAGCTGCAGTCGCTTTGAATCCTGGAGGTTCTTTTTATCTTCCAACAAACATCCTATTAATAGCATTCTTCAACTATTACTACACATTCTTGCAACTGGATCCTGATGATGTGAGTGAACAACTGAAGCGTCAAGGTGCATCAATTCCTCTTGTGCGGCCTGGCAAAAGTTCTGAGTCGAATATCGGTCCTTGGTTCTGCTTTCCTGGCTATATTGGCAGCTGGTCCAGCTGTAGTCGAACAAGCTACTCATCTCACCGCATTTCGGGGGTTTGCAGGCACATCCGTGCTAATCCTTGTTGGTTGTGCTACAGATACCGCGAGAAAGGTTCAAGCCGAAATAATCTCCCAGAAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_242894.p1 GENE.S_Transcript_242894~~S_Transcript_242894.p1 ORF type:complete len:529 (+),score=64.01,SecY|PF00344.16|1.8e-76 S_Transcript_242894:120-1706(+)
MLATVSESLATTSSLTSFSLPRNSLHKPNKWVCKSTLGFGVAFRNKPKPKPKPISCKAASVSSTNSCESSVFDPLGINPDESWGLASAWDSVLGYFAETFEGASGTRKDRSASARGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGYLALSRLGIYVPLGGVNREAFVGNLDQNSFISTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKKEGEAGRKKVLQYTRYASVGFALVQAIGQAFFLRPYVSDFSTEWVVSSVILLTLGSVFTTYLGERISDLKLGNGTSLLIFTNIISYLPASFGRTIEQAYQEGNYTGLALIIASFVSLVFGIVYVQEAERKIPLNYASRYSGRSGGLQKSAYLPFKVNSAGVMPIIFSTSSFALPGTLARFAGLGVLKKAAVALNPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSSESNIGPWFCFPGYIGSWSSCSRTSYSSHRISGVCRHIRANPCWLCYRYREKGSSRNNLPEV*

Click here to download the sequence:
Link to NCBI Protein BLAST