Transcript Information: S_Transcript_243161.p2


Annotated TAIR IDAT1G33980.2
Annotated Gene NameSmg-4/UPF3 family protein
Annotated Gene Symbol(s)ATUPF3, UPF3
Annotation TypeHomolog
Chromosome Positionchr1:12351719-12354401 | Forward length=484
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.088750514658
Replicate 212.60730831858
Replicate 314.051608444648
Condition 2: 8 Hour
Replicate 115.232421655095
Replicate 217.844212605496
Replicate 313.449284798381
Condition 3: 24 Hour
Replicate 116.383662617946
Replicate 216.188436840248
Replicate 315.013121669712


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_243161.p2 GENE.S_Transcript_243161~~S_Transcript_243161.p2 ORF type:5prime_partial len:84 (-),score=18.34 S_Transcript_243161:225-476(-)
GGCCCAGTGAGCAAAAGTAAGCGAGGGGAGTCAAAATATGACAACTCTCAATCTGGCCGCAGTGTCGAAGTTACTGTTCCTTCAGGAGGCCGAAACAGTTCATATATAGAAAATGGTTCTCATAGGCATTTTGGTCGCCGGGGTTCTCCACACAGTGGGAAGGATGATGGCTCTTCAAAAAGGGGAGCCACGGCTGGCCATGGTCCCCATGAGAAACAGGTGTGGGTTCAGAAGTCAGCCGCAGGTTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_243161.p2 GENE.S_Transcript_243161~~S_Transcript_243161.p2 ORF type:5prime_partial len:84 (-),score=18.34 S_Transcript_243161:225-476(-)
GPVSKSKRGESKYDNSQSGRSVEVTVPSGGRNSSYIENGSHRHFGRRGSPHSGKDDGSSKRGATAGHGPHEKQVWVQKSAAGS*

Click here to download the sequence:
Link to NCBI Protein BLAST