Transcript Information: S_Transcript_243228.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.35824953957952
Condition 3: 24 Hour
Replicate 10
Replicate 20.38090439624113
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_243228.p1 GENE.S_Transcript_243228~~S_Transcript_243228.p1 ORF type:complete len:119 (+),score=11.16,gag_pre-integrs|PF13976.2|1.4e-12 S_Transcript_243228:90-446(+)
ATGGCCTCAAACAAAATATTTCCATTAAAAATGCCAATTGAGCACAAGATTGCTCTTAACTGTATCAATGATGAATCAGTACTATGGCATTTAAGATTCGGGCATCTAAATTACAAGAGTTTGAAACTCTTGAAACAAAAGGAAATGGTGATTGGTCTCCCTAACATAAATATTGAAAGAAAAATATGTGAGGGCTGCATTTATGGAAAAATCCATAGATTACCATTTACCACATCATCTTGGAGGGCCAAAGCTCCACTAGAACTTGTTCATGCAGACATATGGGGCCCATCCAAGAATCCCTCTATTGGGGAAAAAGATATTTCTTGTTGTTTGTTGATGATTACTCTTGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_243228.p1 GENE.S_Transcript_243228~~S_Transcript_243228.p1 ORF type:complete len:119 (+),score=11.16,gag_pre-integrs|PF13976.2|1.4e-12 S_Transcript_243228:90-446(+)
MASNKIFPLKMPIEHKIALNCINDESVLWHLRFGHLNYKSLKLLKQKEMVIGLPNINIERKICEGCIYGKIHRLPFTTSSWRAKAPLELVHADIWGPSKNPSIGEKDISCCLLMITLV*

Click here to download the sequence:
Link to NCBI Protein BLAST