Transcript Information: S_Transcript_24323.p1


Annotated TAIR IDAT1G51680.1
Annotated Gene Name4-coumarate:CoA ligase 1
Annotated Gene Symbol(s)4CL1, 4CL.1, AT4CL1
Annotation TypeOrtholog
Chromosome Positionchr1:19159007-19161464 | Reverse length=561
E-Value1.4E-270
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.730545696841
Replicate 220.599637719495
Replicate 325.266226571774
Condition 2: 8 Hour
Replicate 127.72672912088
Replicate 229.829131519635
Replicate 333.629190636829
Condition 3: 24 Hour
Replicate 136.82749991608
Replicate 232.19606042434
Replicate 332.661006891093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24323.p1 GENE.S_Transcript_24323~~S_Transcript_24323.p1 ORF type:complete len:573 (+),score=50.79,AMP-binding|PF00501.24|3.4e-110,AMP-binding_C|PF13193.2|1.6e+04,AMP-binding_C|PF13193.2|3.7e+03,AMP-binding_C|PF13193.2|8.9e-14 S_Transcript_24323:478-2196(+)
ATGGCTGCCAAAGTAGAAACAATTCCACAACAAATGATGACTCATTTCCATGATCATCTTCATGAAAAGAAAGAGGAGGTGAAGGAAGTTGGTGAGGAGGAGTACATCTTCCGTTCGAAGCTCCCGGATATATACATCCCCAACCACCTCCCCCTCCACCAGTACTGCTTCCAGAACATTGCTGACCACCGCGACCGCCTCTGTGTTGTCGACGGGGCCACCGGCCGCGAATGGACCTACACAGAGGCGGAGCTGACAGCCAGGAAAGTAGGCGCAGGGCTCCGCTCCCAGCTGGGTCTAAAGAAGGGGGACGTGATGATGCTGCTCCTCCAGAACAGCCCCGAGTTCATCTTCTCCTTCCTCGGGGCGTCCTTCATCGGAGCCATCAGCACCACGGCCAACCCCTTCTGCACCACGACCGAGATCGAGAAACAGGCTCGAGCGTCCGGTGCCCGAGCCATCATCACCCAGTCCGCATTTGCGGACAAGGTGAGGCCGTATTGTGATGACAAAAAGATCCCCCTAGTGATAGTAGACACCCCGCCTCCCAACGGGTCCCACCACTACTTCTGGGACCTGGCGGGGGACGTGGTGGAAGGAGTACCTAAAGAACAAGTAGAAATATTCCCAGACGACGTGGTGGCCTTACCTTACTCATCAGGCACCACGGGGCTCCCTAAGGGCGTGATGCTCACGCACAAAAGCCTCGTGACAAGTGTCGCTCAACAAGTGGATGGAGAAAATCCGAACCTGTTTTTCCACAGCCAGGACGTGATACTCTGCGTTTTGCCCCTTTTCCACATCTATTCGCTAAACTCCGTGTTGCTGTGTGCTCTACGCGTTGGGGCTGCGATTCTTGTAATGCCAAAGTTCGAGATTTACATGTTGATGGAATTAGTGCAAAAATACAAAGTGACAATTGCCCCCTTTGTGCCCCCAATAGTTTTAGCCATTGCTGAGAACCCCGACTTAGACAAATATGACTTGTCTTCTATAAGGACGGTTATGTCAGGAGCTGCTCCTATGGGCAAAGAATTGGAAGACACCGTGAGGGCTAAGCTCCCTAATGCTAAACTTGGACAGGGTTATGGAATGACAGAGGCAGGGCCAGTACTAGCAATGTGTTTGGCATTTGCAAAGGAGCCAATGGAGGTAAAATCAGGGTCATGTGGGACGGTCGTACGTAACGCAGAATTGAAGATTGTTGACCCGGAAACCGGCCATTCTTTGCCTCGTAACCAGCCCGGTGAGATCTGCATCCGAGGGAGCCAAATCATGAAAGGTTATTTGAAGGACCCTGAGGCCACAGCAAACACCATAGACAAAGACGGATGGTTGCACACTGGTGACATTGGATATGTTGACGACGATGACGAGATCTTCATCGTCGATCGGCTCAAGGAGTTGATCAAGTACAAGGGATTCCAAGTAGCCCCGGCCGAGCTCGAAGGGATGCTCATCAACCACCCCTGTATCATTGATGCCGCCGTTGTTGCGATGAAAGATGAGGCTGCGGGTGAAGTTCCTGTTGCATTTGTTGTCAAATCGAATGGGTCACAAATTAGCGAGGATGAGGTGAAACAATACATCTCAAAACAGGTAGTATTCTATAAGAGAATATATAAGGTTTTCTTTGTGGACGCGATTCCTAAGCTTCCATCAGGGAAAATACTAAGGAAAGAGCTAAGAGCAAGATTAGTAAATGGCATAACCAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24323.p1 GENE.S_Transcript_24323~~S_Transcript_24323.p1 ORF type:complete len:573 (+),score=50.79,AMP-binding|PF00501.24|3.4e-110,AMP-binding_C|PF13193.2|1.6e+04,AMP-binding_C|PF13193.2|3.7e+03,AMP-binding_C|PF13193.2|8.9e-14 S_Transcript_24323:478-2196(+)
MAAKVETIPQQMMTHFHDHLHEKKEEVKEVGEEEYIFRSKLPDIYIPNHLPLHQYCFQNIADHRDRLCVVDGATGREWTYTEAELTARKVGAGLRSQLGLKKGDVMMLLLQNSPEFIFSFLGASFIGAISTTANPFCTTTEIEKQARASGARAIITQSAFADKVRPYCDDKKIPLVIVDTPPPNGSHHYFWDLAGDVVEGVPKEQVEIFPDDVVALPYSSGTTGLPKGVMLTHKSLVTSVAQQVDGENPNLFFHSQDVILCVLPLFHIYSLNSVLLCALRVGAAILVMPKFEIYMLMELVQKYKVTIAPFVPPIVLAIAENPDLDKYDLSSIRTVMSGAAPMGKELEDTVRAKLPNAKLGQGYGMTEAGPVLAMCLAFAKEPMEVKSGSCGTVVRNAELKIVDPETGHSLPRNQPGEICIRGSQIMKGYLKDPEATANTIDKDGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEGMLINHPCIIDAAVVAMKDEAAGEVPVAFVVKSNGSQISEDEVKQYISKQVVFYKRIYKVFFVDAIPKLPSGKILRKELRARLVNGITK*

Click here to download the sequence:
Link to NCBI Protein BLAST